CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH39527
KRH45468
KRH45469
KRH74431
KRH75634

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46570.1	KRH39527	AT2G22680.1	21798944
AT5G46570.1	KRH45468	AT2G22680.1	21798944
AT5G46570.1	KRH45469	AT2G22680.1	21798944
AT5G46570.1	KRH74431	AT2G22680.1	21798944
AT5G46570.1	KRH75634	AT2G22680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	98.39	98.79
VIT_02s0012g01140.t01	Wine grape	cytosol	88.15	88.69
PGSC0003DMT400004190	Potato	cytosol	83.13	84.15
GSMUA_Achr11P...	Banana	cytosol	82.53	83.54
AT5G46570.1	Thale cress	cytosol	80.92	82.41
Bra025014.1-P	Field mustard	cytosol	80.32	81.8
CDX77672	Canola	cytosol	80.32	81.8
CDY33480	Canola	cytosol	80.32	81.8
GSMUA_Achr4P05600_001	Banana	cytosol	79.92	81.06
GSMUA_Achr4P12250_001	Banana	cytosol	81.33	81.0
TraesCS1D01G194300.1	Wheat	cytosol	82.13	80.83
TraesCS1B01G192300.3	Wheat	cytosol	81.93	80.63
Os10t0571300-01	Rice	plasma membrane	82.53	80.27
TraesCS1A01G190200.2	Wheat	cytosol	81.93	79.84
EER94456	Sorghum	cytosol	80.92	79.8
Zm00001d030021_P001	Maize	cytosol	80.52	79.41
CDX78818	Canola	cytosol	77.51	77.82
CDY44497	Canola	cytosol	77.11	77.42
Bra013274.1-P	Field mustard	cytosol	77.11	77.42
Zm00001d047053_P004	Maize	cytosol	80.32	75.19
HORVU1Hr1G049860.2	Barley	mitochondrion	81.93	70.59
CDY01510	Canola	cytosol	58.84	61.43
KRH29720	Soybean	cytosol	37.35	60.98
CDY01511	Canola	cytosol	42.77	60.51
KRH14029	Soybean	cytosol	59.24	59.36
CDX90430	Canola	cytosol	42.57	59.05
KRH74087	Soybean	mitochondrion	59.84	58.55
KRG88787	Soybean	cytosol	57.23	58.04
KRH23152	Soybean	cytosol, endoplasmic reticulum, mitochondrion	56.22	57.38
KRH65064	Soybean	endoplasmic reticulum	56.22	57.03
KRH41166	Soybean	cytosol	55.82	56.85
KRH59867	Soybean	endoplasmic reticulum	55.82	56.85
KRH48161	Soybean	cytosol	56.02	56.82
KRH24715	Soybean	endoplasmic reticulum	58.03	55.47
KRH29723	Soybean	cytosol	17.47	55.41
KRH75770	Soybean	plastid	46.99	53.92
KRH10186	Soybean	endoplasmic reticulum, extracellular, plastid	10.84	52.43

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100795258	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20
EMBL:ACUP02010398	EnsemblPlantsGene:GLYMA_17G153400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009742
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
UniProt:I1MVD1	InterPro:IPR000719	InterPro:IPR011990	EnsemblPlants:KRH04312	ProteinID:KRH04312	ProteinID:KRH04312.1
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF260	InterPro:Prot_kinase_dom
SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000233EC37	:

Description

hypothetical protein

Coordinates

chr17:+:12874040..12880103

Molecular Weight (calculated)

55913.9 Da

IEP (calculated)

6.284

GRAVY (calculated)

-0.343

Length

498 amino acids

Sequence
(BLAST)

001: MGCLHSKTAH LHSPEDPPTA LPDSKKPDPG NGGDDVDQEC QVQAFKEYGL IELRRATNEF STDYIVSESG EKAPNVVYRG KLENNRLVAV KRFSKLSWPD
101: AQQFMAEAAG VGKVRHKRMV NLIGCCAEGD ERLLVAEYMP NDTLSKHLFH WDKQPLPWEM RVRVAYHVAQ ALDHCSLENH KIYHDLNAYR ILFDEDGDPR
201: LSSFGLMKNS RDGKSYSTNL AYTPPEFLRT GRIIPESVIY SYGTVLLDLL SGKHIPPSHA LDLIRGKNVL LLMDSSLEGQ YANDDATKLV ELASKCLQFE
301: ARERPEIKFL LTAVAPLQRQ KEVASLVLMG LTKNTAVAVL PTMLSPLGKA CARMDLTAVH DILLKTGYKD EEGAENELSF QEWTQQVQDI LNTKKFGDIA
401: FRDKDFKNAI EYYSKLVVMM SVPSATVFAR RAFSYLMNDQ AELALRDAMQ AQVCIPDWPT AFYLQALALS KLGMETDAHD MLNDGAAFEA KRSNSWRG

Best Arabidopsis Sequence Match ( AT5G46570.1 )
(BLAST)

001: MGCLHSKTAN LPSSDDPSAP NKPESVNGDQ VDQEIQNFKE FELNELRKAT NGFSPSCIVS EGGEKAPNVV YRGKLEGNHL VAIKRFSRQS WPDAQQFVVE
101: ATGVGKLRNK RIVSLIGCCA EGDERLLVAE YMPNDTLSKH LFHWEKQPLP WDMRVRIADY IAEALDYCNI ENRKIYHDLN AYRILFDEEG DPRLSTFGLM
201: KNSRDGKSYS TNLAYTPPEF LRTGRVIPES VIFSYGTILL DLLSGKHIPP SHALDIIRGK NALLLMDSSL EGQYANDDAT KLVDLASKCL QSEAKDRPDT
301: KFLLSAVAPL QKQEEVASHV LMGLPKNTVI LPTMLSPLGK ACAKMDLATF HDILLKTGYR DEEGAENELS FQEWTQQVQE MLNTKKFGDI AFRDKDFKNS
401: IEYYSKLVGM MPVPSATVFA RRAFSYLMTD QQELALRDAM QAQVCIPEWP TAFYLQALAL SKLGMETDAQ DMLNDGAAYD AKRQNSWRC

Arabidopsis Description

BSK2Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.