CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41166	Soybean	cytosol	96.32	96.32
VIT_02s0025g03550.t01	Wine grape	cytosol	80.37	80.53
PGSC0003DMT400024464	Potato	cytosol	77.91	78.23
Solyc11g064890.1.1	Tomato	cytosol	77.71	78.03
Bra027800.1-P	Field mustard	cytosol	76.89	77.53
CDY68942	Canola	plasma membrane	76.89	77.37
CDY64092	Canola	cytosol	76.69	77.32
AT1G63500.1	Thale cress	cytosol	76.28	76.59
CDY34359	Canola	cytosol	76.28	76.43
CDY66348	Canola	cytosol	75.26	76.35
CDY25502	Canola	cytosol	76.07	76.23
Bra027646.1-P	Field mustard	cytosol	76.07	76.23
KRH65064	Soybean	endoplasmic reticulum	76.07	75.76
CDY65190	Canola	cytosol	48.88	75.39
KRH48161	Soybean	cytosol	75.26	74.95
GSMUA_Achr1P15240_001	Banana	cytosol	74.64	74.19
AT5G41260.1	Thale cress	cytosol	73.42	73.72
PGSC0003DMT400012025	Potato	cytosol	73.21	73.66
Solyc12g099830.1.1	Tomato	cytosol	73.01	73.46
KRH29720	Soybean	cytosol	45.6	73.11
EES11678	Sorghum	cytosol	71.17	71.02
TraesCS2D01G597600.1	Wheat	cytosol, mitochondrion	70.76	70.04
TraesCS2B01G604300.1	Wheat	mitochondrion	70.76	70.04
TraesCS2A01G582500.1	Wheat	cytosol, mitochondrion	70.76	70.04
KRH23152	Soybean	cytosol, endoplasmic reticulum, mitochondrion	69.73	69.88
Zm00001d026653_P004	Maize	plasma membrane	70.55	69.56
KRG88787	Soybean	cytosol	69.53	69.25
Bra040944.1-P	Field mustard	mitochondrion	43.15	69.18
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	71.37	68.03
TraesCS7B01G228900.2	Wheat	cytosol	67.89	66.67
TraesCS7D01G324900.2	Wheat	cytosol	65.64	66.6
HORVU7Hr1G078530.3	Barley	cytosol	67.89	66.14
TraesCS7A01G328100.2	Wheat	cytosol	67.28	66.06
KRH75770	Soybean	plastid	58.28	65.67
KRH24715	Soybean	endoplasmic reticulum	69.33	65.07
HORVU2Hr1G123650.2	Barley	cytosol	70.35	60.56
Os04t0684200-01	Rice	plasma membrane	13.91	58.62
KRH14029	Soybean	cytosol	58.69	57.75
KRH57593	Soybean	cytosol, endoplasmic reticulum, mitochondrion	57.87	57.06
KRH74087	Soybean	mitochondrion	59.1	56.78
KRH10186	Soybean	endoplasmic reticulum, extracellular, plastid	11.86	56.31
KRH29723	Soybean	cytosol	18.0	56.05
KRH04312	Soybean	cytosol	56.85	55.82

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100797107	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20
EMBL:ACUP02003342	EnsemblPlantsGene:GLYMA_05G207400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009742
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	InterPro:IPR011990	UniProt:K7KS32	EnsemblPlants:KRH59867	ProteinID:KRH59867	ProteinID:KRH59867.1
ProteinID:KRH59868.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF147
InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002339866

Description

hypothetical protein

Coordinates

chr5:+:38958207..38968746

Molecular Weight (calculated)

54790.4 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.337

Length

489 amino acids

Sequence
(BLAST)

001: MGCGFSKYTA CCTGSEQDGL AAEAQVDGGN EDNVVEGVDL PWFHEFTIDQ LRKATSGFAI ENIVSEHGEK APNVVYKGRL DNQMRIAVKR FNRNAWPEAQ
101: PFLEEARAVG QLRNQRLINL LGCCCEGEER LLVAEYMPND TLTKHLFHWE TQPMRWAMRM RVALCLAQAL EYCTSKGRAL YHDLNAYRVL YDDDYNPRLS
201: CFGLMKNSRD GRSYSTNLAF TPPEYLRTGR VTPESVTYSF GTLLLDLLSG KHIPPSHALD LIRDKNLQML SDSCLEGELT NDDGTELVRL ASRCLQSEPR
301: ERPNPKSLVA ALIPLQKDSE VPSHVLMGIP DGTAAFPLSP LGEACLRMDL TALHEVMEKI GYKDDEGAAT ELSFQMWTNQ MQETLNSKKK GDAAFRHKDF
401: KTAIDSYTMF IDVGTMVSPT VYVRRSLCYL MSNMPDEALN DAMQAQVISP VWYIAFYLQA VALLALGKEN DAQVALKEGS SLETKKNTN

Best Arabidopsis Sequence Match ( AT1G63500.1 )
(BLAST)

001: MGCEVSKLCA FCCVSDPEGS NHGVTGLDED RRGEGNDLPQ FREFSIETLR NATSGFATEN IVSEHGEKAP NVVYKGKLDN QRRIAVKRFN RKAWPDSRQF
101: LEEAKAVGQL RNYRMANLLG CCYEGEERLL VAEFMPNETL AKHLFHWESQ PMKWAMRLRV ALHIAQALEY CTGKGRALYH DLNAYRVLFD DDSNPRLSCF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVMYSYGT LLLDLLSGKH IPPSHALDLI RDRNIQMLID SCLEGQFSSD DGTELIRLAS RCLQYEPRER
301: PNPKSLVTAM IPLQKDLETP SHQLMGIPSS ASTTPLSPLG EACLRTDLTA IHEILEKLSY KDDEGAATEL SFQMWTNQMQ DSLNFKKKGD VAFRHKEFAN
401: AIDCYSQFIE GGTMVSPTVY ARRSLCYLMN EMPQEALNDA MQAQVISPAW HIASYLQAVA LSALGQENEA HAALKDGSML ESKRNRL

Arabidopsis Description

BSK7BSK7 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.