Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
endoplasmic reticulum: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G00710.1 | KRH53813 | AT4G39400.1 | 18653891 |
| AT4G00710.1 | KRH64131 | AT4G39400.1 | 18653891 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48161 | Soybean | cytosol | 96.54 | 96.54 |
| VIT_15s0046g02900.t01 | Wine grape | cytosol | 85.54 | 85.54 |
| CDY07203 | Canola | cytosol | 79.43 | 80.58 |
| AT4G00710.1 | Thale cress | cytosol | 79.63 | 79.96 |
| Bra037353.1-P | Field mustard | cytosol | 78.82 | 79.96 |
| CDY51145 | Canola | cytosol | 78.62 | 79.75 |
| CDX91898 | Canola | cytosol | 79.02 | 79.02 |
| CDX74345 | Canola | cytosol | 78.82 | 78.82 |
| Bra000962.1-P | Field mustard | cytosol | 78.62 | 78.62 |
| GSMUA_Achr1P15240_001 | Banana | cytosol | 77.39 | 77.24 |
| KRH59867 | Soybean | endoplasmic reticulum | 75.76 | 76.07 |
| KRH41166 | Soybean | cytosol | 75.56 | 75.87 |
| KRH29720 | Soybean | cytosol | 45.21 | 72.79 |
| TraesCS2D01G597600.1 | Wheat | cytosol, mitochondrion | 73.12 | 72.67 |
| TraesCS2A01G582500.1 | Wheat | cytosol, mitochondrion | 73.12 | 72.67 |
| EES11678 | Sorghum | cytosol | 72.51 | 72.65 |
| KRG88787 | Soybean | cytosol | 72.51 | 72.51 |
| TraesCS2B01G604300.1 | Wheat | mitochondrion | 72.91 | 72.47 |
| CDX75149 | Canola | cytosol, mitochondrion, peroxisome | 10.59 | 72.22 |
| KRH23152 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 71.69 | 72.13 |
| Zm00001d026653_P004 | Maize | plasma membrane | 72.1 | 71.37 |
| Zm00001d001780_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 72.71 | 69.59 |
| AT1G01740.2 | Thale cress | cytosol | 68.23 | 69.36 |
| TraesCS7B01G228900.2 | Wheat | cytosol | 69.65 | 68.67 |
| TraesCS7D01G324900.2 | Wheat | cytosol | 67.41 | 68.67 |
| KRH75770 | Soybean | plastid | 60.49 | 68.43 |
| TraesCS7A01G328100.2 | Wheat | cytosol | 69.04 | 68.07 |
| HORVU7Hr1G078530.3 | Barley | cytosol | 69.45 | 67.93 |
| KRH24715 | Soybean | endoplasmic reticulum | 69.65 | 65.64 |
| CDX90056 | Canola | cytosol | 64.77 | 65.16 |
| Bra033237.1-P | Field mustard | cytosol | 64.77 | 65.16 |
| CDY15155 | Canola | cytosol | 63.75 | 64.14 |
| HORVU2Hr1G123650.2 | Barley | cytosol | 72.71 | 62.85 |
| Os04t0684200-01 | Rice | plasma membrane | 14.46 | 61.21 |
| KRH14029 | Soybean | cytosol | 61.3 | 60.56 |
| KRH29723 | Soybean | cytosol | 19.14 | 59.87 |
| KRH74087 | Soybean | mitochondrion | 61.51 | 59.33 |
| KRH57593 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 58.04 | 57.46 |
| CDY64342 | Canola | extracellular | 7.54 | 56.92 |
| CDY20930 | Canola | extracellular, mitochondrion | 7.74 | 56.72 |
| KRH04312 | Soybean | cytosol | 57.03 | 56.22 |
| KRH10186 | Soybean | endoplasmic reticulum, extracellular, plastid | 11.0 | 52.43 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.10 | EntrezGene:100781311 | MapMan:11.3.2.1.5 | MapMan:18.4.1.42 | Gene3D:3.30.200.20 |
| EMBL:ACUP02001308 | EnsemblPlantsGene:GLYMA_03G011000 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004675 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007166 | GO:GO:0007178 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009742 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0038023 |
| UniProt:I1JK97 | InterPro:IPR000719 | InterPro:IPR011990 | ProteinID:KRH65063.1 | EnsemblPlants:KRH65064 | ProteinID:KRH65064 |
| ProteinID:KRH65064.1 | InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF147 |
| InterPro:Prot_kinase_dom | SUPFAM:SSF48452 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00023398F5 |
Description
hypothetical protein
Coordinates
chr3:-:1053458..1060669
Molecular Weight (calculated)
55176.8 Da
IEP (calculated)
5.838
GRAVY (calculated)
-0.360
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQCSRLIP CCVDSQVKAS VIETPDAEIE DSSEASNWPT FREFTLEQLK NATSGFAVEN IVSEHGEKAP NVVYKGKLEN QMRIAVKRFN RNAWPDARQF
101: LEESRSVGQL RNQRLANLLG CCCEGEERLL VAEYMPNETL AKHLFHWETQ PMKWAMRLRV VLHLAQALEY CTSKGRALYH DLNAYRVLFD EDGNPRLSSF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVIYSFGT LLLDLLSGKH IPPSHALDVI RGRNLQMLTD SCLEGQFSDD DGTELVRLAS RCLQYEPRER
301: PNPKSLVAAL APLQKETEVL SHILMGIQHS TTFASLSPLG EACSRKDLTA IHEVLESLGY KDDEGVANEL SFQMWTDQMQ DTLNCKKKGD VAFRQKDFRL
401: AIECYSQFID TGTMVSPTVY ARRSLCYLIS DMPQEALNDA MQAEVISPVW HIASYLQSVA LTGLGMENEA QAALKEGTTL ESKRNATPKL K
101: LEESRSVGQL RNQRLANLLG CCCEGEERLL VAEYMPNETL AKHLFHWETQ PMKWAMRLRV VLHLAQALEY CTSKGRALYH DLNAYRVLFD EDGNPRLSSF
201: GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVIYSFGT LLLDLLSGKH IPPSHALDVI RGRNLQMLTD SCLEGQFSDD DGTELVRLAS RCLQYEPRER
301: PNPKSLVAAL APLQKETEVL SHILMGIQHS TTFASLSPLG EACSRKDLTA IHEVLESLGY KDDEGVANEL SFQMWTDQMQ DTLNCKKKGD VAFRQKDFRL
401: AIECYSQFID TGTMVSPTVY ARRSLCYLIS DMPQEALNDA MQAEVISPVW HIASYLQSVA LTGLGMENEA QAALKEGTTL ESKRNATPKL K
001: MGGQCSSLSC CRNTSHKTAV LEAPDVDNGE SSEITDVPNF REYTLEQLKA ATSGFAVEYI VSEHGEKAPN VVYKGKLENQ KKIAVKRFTR MAWPDSRQFL
101: EEARSVGQLR SERMANLLGC CCEGDERLLV AEFMPNETLA KHLFHWETQP MKWTMRLRVV LYLAQALEYC TSKGRTLYHD LNAYRVLFDE ECNPRLSTFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRITP ESVIYSFGTL LLDLLSGKHI PPSHALDLIR DRNLQTLTDS CLDGQFSDSD GTELVRLASR CLQYEARERP
301: NTKSLVTALT PLQKETEVLS HVLMGLPHSG SVSPLSPLGE ACSRRDLTAM LEILEKLGYK DDEGVTNELS FHMWTDQMQE SLNSKKKGDV AFRQKDFREA
401: IECYTQFIDG GMISPTVCAR RSLCYLMSDM PKEALDDAIQ AQVISPVWHV ASYLQSASLG ILGMEKESQI ALKEGSNLEA KMNGVPRVK
101: EEARSVGQLR SERMANLLGC CCEGDERLLV AEFMPNETLA KHLFHWETQP MKWTMRLRVV LYLAQALEYC TSKGRTLYHD LNAYRVLFDE ECNPRLSTFG
201: LMKNSRDGKS YSTNLAFTPP EYLRTGRITP ESVIYSFGTL LLDLLSGKHI PPSHALDLIR DRNLQTLTDS CLDGQFSDSD GTELVRLASR CLQYEARERP
301: NTKSLVTALT PLQKETEVLS HVLMGLPHSG SVSPLSPLGE ACSRRDLTAM LEILEKLGYK DDEGVTNELS FHMWTDQMQE SLNSKKKGDV AFRQKDFREA
401: IECYTQFIDG GMISPTVCAR RSLCYLMSDM PKEALDDAIQ AQVISPVWHV ASYLQSASLG ILGMEKESQI ALKEGSNLEA KMNGVPRVK
Arabidopsis Description
BSK3Serine/threonine-protein kinase BSK3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4L3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.