CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40323	Canola	cytosol	97.64	92.67
AT5G01060.1	Thale cress	cytosol	84.55	78.96
CDY48109	Canola	plastid	35.62	78.67
CDY70900	Canola	mitochondrion	50.21	75.24
CDY70772	Canola	mitochondrion	50.21	75.24
CDY69804	Canola	cytosol	69.74	69.89
CDX73964	Canola	cytosol	73.39	69.37
CDY44690	Canola	mitochondrion	72.96	69.25
CDY07908	Canola	cytosol	72.53	68.56
CDY22182	Canola	cytosol	55.58	67.8
CDX75149	Canola	cytosol, mitochondrion, peroxisome	8.8	56.94
CDY65190	Canola	cytosol	38.63	56.78
CDX76175	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	59.01	56.12
CDY13169	Canola	cytosol	59.01	56.01
CDY67218	Canola	cytosol	58.15	55.19
CDY68942	Canola	plasma membrane	57.3	54.94
CDY64092	Canola	cytosol	57.08	54.85
CDY33003	Canola	cytosol	57.51	54.58
CDY66348	Canola	cytosol	56.44	54.56
CDY32670	Canola	cytosol	56.87	54.19
CDY02851	Canola	cytosol	56.87	54.19
CDY34359	Canola	cytosol	56.65	54.1
CDY25502	Canola	cytosol	56.44	53.89
CDY13171	Canola	cytosol	10.73	53.76
CDY07203	Canola	cytosol	54.72	52.69
CDY51145	Canola	cytosol	54.51	52.48
CDX91898	Canola	cytosol	54.72	51.93
CDX74345	Canola	cytosol	54.72	51.93
CDY15155	Canola	cytosol	51.07	48.77
CDX90056	Canola	cytosol	50.21	47.95
CDX78818	Canola	cytosol	50.21	47.18
CDY44497	Canola	cytosol	49.57	46.57
CDY20930	Canola	extracellular, mitochondrion	6.65	46.27
CDY64342	Canola	extracellular	6.44	46.15
CDY33480	Canola	cytosol	48.28	46.01
CDX77672	Canola	cytosol	48.28	46.01
CDX69121	Canola	cytosol	49.57	45.65
CDX76321	Canola	cytosol	49.36	45.36
CDX75483	Canola	cytosol	49.57	45.29
CDY17529	Canola	cytosol	48.93	44.97
CDY01839	Canola	cytosol, plastid	45.06	43.66
CDX96069	Canola	cytosol, plastid	44.64	43.24
CDY13173	Canola	cytosol	7.08	40.74
CDY01511	Canola	cytosol	30.47	40.34
CDY01510	Canola	cytosol	40.99	40.04
CDY12866	Canola	nucleus	14.81	39.66
CDX90430	Canola	cytosol	30.47	39.55
CDY26795	Canola	cytosol	39.06	39.06
CDY47487	Canola	cytosol	38.41	38.41
CDY07880	Canola	cytosol	31.97	38.4
CDY02219	Canola	cytosol	38.2	38.12
CDY03206	Canola	extracellular, plasma membrane	6.87	37.65
CDX73221	Canola	cytosol	6.65	35.23
CDY66812	Canola	cytosol	8.58	34.19

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:A0A078FEE0
UniProt:A0A078FEE0	EnsemblPlants:CDY10478	ProteinID:CDY10478	ProteinID:CDY10478.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00032411001	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF201	InterPro:Prot_kinase_dom	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EE3C98	:	:	:

Description

BnaCnng03790DBnaCnng03790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEE0]

Coordinates

chrLK032003:+:755718..758165

Molecular Weight (calculated)

53010.7 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.365

Length

466 amino acids

Sequence
(BLAST)

001: MGCICFKSLR LKPPPSITST VLRIATDGFS PGNIVSEHNE WVPNTVYKGK LGDGRRIAVK RFQRLSWPDP FQFIKEAEAV GRLRSEHMAN LIGYCSDDSE
101: RLLVAEFMPN STLSKHLFHW EKRPMKWQTR LKVALHTAKA LEYCNDKGIN LYHDLNPYRI LFDKVGNPKL SCFGLMKNSH EGKNHSTNVA FAPPEYLRLG
201: TLIPESVTYS FGTLLLDLMS GRHIPPNHAL DLFQTKNYLV LVDSALDGQF SDEDRTELMH IASRCLKTEP EERPSIRFLM STLSRLQRRA ELWPTSVKRL
301: MPSSSNKKTK HATEPLKLTP FGDACLRADL CTMHELLEKL GYGADDDVIS NEFSFQMWTG EMQENMDHKN HGDAAFRAKD YDTGIEFYTE FMYGAPTVSP
401: TVLARRCLCY LMTEMFSEAL SDAMQAQVAS PEWPIPLYLQ AACLFKLDME AEAKEALRHG SALESY

Best Arabidopsis Sequence Match ( AT5G01060.1 )
(BLAST)

001: MGCICFKSWR RSSSSPSITS TVIDDLENVR EYDADDDGGH YPLIFREFSL EQLRIATDGF SAGNIVSEHN DSVPNIVYKG KLGDGRRIAV KRFQRLSWPD
101: PFEFINEAQA VGRLRSEHMA NLIGCCCDDN ERLLVAEYMP NGTLAKHLFH WEKRPMKWEM RLKVALHTAR ALEYCNDKGI DLYHDLNPYR IMFDKTGIPK
201: LSCFGLMKNS HEGKIYSTNL AFAPPEYLRL GTVIAESVTF SFGTLLLDLM SGRHIPPNHA LDLFRGKNYL VLMDSALDGQ FSDEDRTELI HVASRCFKTE
301: PEERPSIKFL KATLSRLQKR AKLCPINVKR PMSPPSKNLP EKTKPATESL KLTPFGDACS RADLSSIHEL LEKLGYEEDN GVGNEFSFQM WTGEMQENMD
401: YKKHGDAAFL AKDFDTAIEF YTEFMTGAPT VSPTVLARRC LCYLMTEMFS EALSDAMQAQ VASPEWPIPL YLQAACLFKL EMEAEAKEAL RHGSALEAY

Arabidopsis Description

Kinase with tetratricopeptide repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LFD0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.