CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68299
CDX69121
CDX72702
CDX72833
CDX74345
CDX75483
CDX76321
CDX90332
CDX91898
CDX96350
CDY02804
CDY07049	plasma membrane
CDY07203
CDY07629	plasma membrane
CDY12143
CDY17529
CDY20508	plasma membrane
CDY23595	plasma membrane
CDY24191	plasma membrane
CDY32716
CDY36679
CDY41977
CDY43996	plasma membrane
CDY51145
CDY53185
CDY60337	plasma membrane
CDY61712	plasma membrane
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39400.1	CDX68299	AT1G71830.1	16473966
AT4G39400.1	CDX72833	AT1G71830.1	16473966
AT4G39400.1	CDX96350	AT1G71830.1	16473966
AT4G39400.1	CDY36679	AT1G71830.1	16473966
AT4G39400.1	CDY07049	AT2G40060.1	23975899
AT4G39400.1	CDY07629	AT2G40060.1	23975899
AT4G39400.1	CDY20508	AT2G40060.1	23975899
AT4G39400.1	CDY60337	AT2G40060.1	23975899
AT4G39400.1	CDY61712	AT2G40060.1	23975899
AT4G39400.1	CDY23595	AT3G13380.1	24064770
AT4G39400.1	CDY24191	AT3G13380.1	24064770
AT4G39400.1	CDY43996	AT3G13380.1	24064770
AT4G39400.1	CDX74345	AT4G00710.1	18653891
AT4G39400.1	CDX91898	AT4G00710.1	18653891
AT4G39400.1	CDY07203	AT4G00710.1	18653891
AT4G39400.1	CDY51145	AT4G00710.1	18653891
AT4G39400.1	CDX69121	AT4G35230.1	18653891
AT4G39400.1	CDX75483	AT4G35230.1	18653891
AT4G39400.1	CDX76321	AT4G35230.1	18653891
AT4G39400.1	CDY17529	AT4G35230.1	18653891
AT4G39400.1	CDX72702	AT4G39400.1	15935775
AT4G39400.1	CDX90332	AT4G39400.1	15935775
AT4G39400.1	CDY12143	AT4G39400.1	15935775
AT4G39400.1	CDY41977	AT4G39400.1	15935775
AT4G39400.1	CDY53185	AT4G39400.1	15935775
AT4G39400.1	CDY66903	AT4G39400.1	15935775
AT4G39400.1	CDY66904	AT4G39400.1	15935775
AT4G39400.1	CDX72702	AT4G39400.1	16473966
AT4G39400.1	CDX90332	AT4G39400.1	16473966
AT4G39400.1	CDY12143	AT4G39400.1	16473966
AT4G39400.1	CDY41977	AT4G39400.1	16473966
AT4G39400.1	CDY53185	AT4G39400.1	16473966
AT4G39400.1	CDY66903	AT4G39400.1	16473966
AT4G39400.1	CDY66904	AT4G39400.1	16473966
AT4G39400.1	CDY02804	AT5G58220.1	15319482
AT4G39400.1	CDY32716	AT5G58220.1	15319482

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53185	Canola	plasma membrane	82.97	32.22
CDY41977	Canola	plasma membrane	86.81	32.15
CDX72702	Canola	plasma membrane	82.97	30.65
CDY12143	Canola	plasma membrane	76.5	29.81
AT4G39400.1	Thale cress	plasma membrane, vacuole	84.17	29.35
Zm00001d014769_P001	Maize	cytosol, extracellular, nucleus	19.42	28.32
CDX90332	Canola	plasma membrane	70.5	26.58
PGSC0003DMT400050728	Potato	golgi, plasma membrane, vacuole	53.24	18.41
Solyc04g051510.1.1	Tomato	golgi, plasma membrane, vacuole	53.0	18.31
HORVU3Hr1G068010.1	Barley	plasma membrane	25.42	18.31
VIT_07s0031g01850.t01	Wine grape	plasma membrane	52.76	18.26
KRH53813	Soybean	plasma membrane	51.8	18.24
KRH64131	Soybean	plasma membrane	51.8	18.2
GSMUA_Achr6P35950_001	Banana	plasma membrane	36.21	16.82
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	35.49	16.76
HORVU3Hr1G068020.2	Barley	cytosol	32.85	16.27
Zm00001d043634_P001	Maize	plasma membrane	41.73	15.62
TraesCS3D01G496100.1	Wheat	plasma membrane	40.29	15.53
TraesCS3A01G490100.1	Wheat	plasma membrane	33.09	15.42
Zm00001d011721_P001	Maize	plasma membrane	41.25	15.33
TraesCS3D01G246500.1	Wheat	plasma membrane	41.01	15.21
EES03532	Sorghum	plasma membrane	40.77	15.18
TraesCS3B01G550900.1	Wheat	plasma membrane	39.33	15.14
TraesCS3A01G245000.1	Wheat	plasma membrane	40.53	15.05
Os01t0718300-01	Rice	plasma membrane	40.29	14.99
TraesCS3B01G551200.1	Wheat	plasma membrane	38.37	14.81
HORVU3Hr1G068000.2	Barley	plastid	40.29	14.36
CDY49128	Canola	vacuole	13.91	14.22
GSMUA_AchrUn_...	Banana	plasma membrane	27.1	14.05
TraesCS3B01G275000.1	Wheat	plasma membrane, plastid	40.53	14.04
OQU86764	Sorghum	plasma membrane	32.37	13.6
CDY42431	Canola	plasma membrane	16.79	13.26
CDY10547	Canola	plasma membrane	34.29	12.98
GSMUA_Achr1P05250_001	Banana	golgi, plasma membrane	24.94	12.67
CDY42373	Canola	plasma membrane	34.77	12.45
CDY17621	Canola	plasma membrane	32.37	11.99
CDY03088	Canola	plasma membrane	32.61	11.97
CDX98990	Canola	plasma membrane	25.66	11.56
CDY43996	Canola	plasma membrane	29.74	11.4
CDY23595	Canola	plasma membrane	29.74	11.39
CDY66377	Canola	cytosol, plastid, vacuole	11.27	11.3
CDY16355	Canola	cytosol, plastid, vacuole	11.27	11.3
CDY24191	Canola	cytosol	14.63	11.23
CDX70023	Canola	plasma membrane	22.06	11.0
CDX73079	Canola	plasma membrane	25.9	9.63
CDX96537	Canola	plasma membrane	25.66	9.54
CDY66904	Canola	cytosol, peroxisome, plasma membrane	2.64	2.32
CDY24190	Canola	cytosol	0.48	1.3

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078JH26	EnsemblPlants:CDY66903	ProteinID:CDY66903	ProteinID:CDY66903.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00056823001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019
PANTHER:PTHR27000	PANTHER:PTHR27000:SF220	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0004EEE474	SEG:seg

Description

BnaC01g40650DBnaC01g40650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH26]

Coordinates

chrLK035568:+:241..2341

Molecular Weight (calculated)

45372.5 Da

IEP (calculated)

5.965

GRAVY (calculated)

0.155

Length

417 amino acids

Sequence
(BLAST)

001: MKTFLSFLLS ATTFFSFFSL SLEASSASQS LYREIHQLIS FKNVLPDKNL LPDWSPNKNP CTYDGVTCRD DRVTSIDLSS KPLNVGFSAV ASSLLSLTGL
101: ESLSLSDSHI NGSITTFKCS PSLTTLDLSR NSISGPVTTL SSLGSCIGLK HLNVSSNTLD FPAKISGGMK KLSSLEVLDL SANSLSGDNV VGWALSDGCE
201: ALKHFAISGN KISGDVDVSR CVNLDLRYLS LAANKFTGEI PEILSVANCS ELVSLHLSFN YLSGTIPSSL GSLSKLRDLK LWMNMLEGEI PQELMYVNTL
301: ETLILDFNDL TGEIPSGLSN CTNLNWISLS NNKLTGQIPR WIGRLENLAI LKLSNNSFHG NIPAELGDCR SLIWLDLNTN NLNGTIPAEI LVRCRICLFS
401: TWVITSSLVR SLTRWVI

Best Arabidopsis Sequence Match ( AT1G55610.1 )
(BLAST)

0001: MKQRWLLVLI LCFFTTSLVM GIHGKHLIND DFNETALLLA FKQNSVKSDP NNVLGNWKYE SGRGSCSWRG VSCSDDGRIV GLDLRNSGLT GTLNLVNLTA
0101: LPNLQNLYLQ GNYFSSGGDS SGSDCYLQVL DLSSNSISDY SMVDYVFSKC SNLVSVNISN NKLVGKLGFA PSSLQSLTTV DLSYNILSDK IPESFISDFP
0201: ASLKYLDLTH NNLSGDFSDL SFGICGNLTF FSLSQNNLSG DKFPITLPNC KFLETLNISR NNLAGKIPNG EYWGSFQNLK QLSLAHNRLS GEIPPELSLL
0301: CKTLVILDLS GNTFSGELPS QFTACVWLQN LNLGNNYLSG DFLNTVVSKI TGITYLYVAY NNISGSVPIS LTNCSNLRVL DLSSNGFTGN VPSGFCSLQS
0401: SPVLEKILIA NNYLSGTVPM ELGKCKSLKT IDLSFNELTG PIPKEIWMLP NLSDLVMWAN NLTGTIPEGV CVKGGNLETL ILNNNLLTGS IPESISRCTN
0501: MIWISLSSNR LTGKIPSGIG NLSKLAILQL GNNSLSGNVP RQLGNCKSLI WLDLNSNNLT GDLPGELASQ AGLVMPGSVS GKQFAFVRNE GGTDCRGAGG
0601: LVEFEGIRAE RLERLPMVHS CPATRIYSGM TMYTFSANGS MIYFDISYNA VSGFIPPGYG NMGYLQVLNL GHNRITGTIP DSFGGLKAIG VLDLSHNNLQ
0701: GYLPGSLGSL SFLSDLDVSN NNLTGPIPFG GQLTTFPVSR YANNSGLCGV PLRPCGSAPR RPITSRIHAK KQTVATAVIA GIAFSFMCFV MLVMALYRVR
0801: KVQKKEQKRE KYIESLPTSG SCSWKLSSVP EPLSINVATF EKPLRKLTFA HLLEATNGFS AETMVGSGGF GEVYKAQLRD GSVVAIKKLI RITGQGDREF
0901: MAEMETIGKI KHRNLVPLLG YCKVGEERLL VYEYMKWGSL ETVLHEKSSK KGGIYLNWAA RKKIAIGAAR GLAFLHHSCI PHIIHRDMKS SNVLLDEDFE
1001: ARVSDFGMAR LVSALDTHLS VSTLAGTPGY VPPEYYQSFR CTAKGDVYSY GVILLELLSG KKPIDPGEFG EDNNLVGWAK QLYREKRGAE ILDPELVTDK
1101: SGDVELFHYL KIASQCLDDR PFKRPTMIQL MAMFKEMKAD TEEDESLDEF SLKETPLVEE SRDKEP

Arabidopsis Description

BRL1Serine/threonine-protein kinase BRI1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWC8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.