Factsheet for PGSC0003DMT400050728

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 2
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400004592
PGSC0003DMT400046993	plasma membrane
PGSC0003DMT400050728
PGSC0003DMT400056932	plasma membrane
PGSC0003DMT400070819
PGSC0003DMT400077326	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39400.1	PGSC0003DMT400070819	AT1G71830.1	16473966
AT4G39400.1	PGSC0003DMT400046993	AT3G13380.1	24064770
AT4G39400.1	PGSC0003DMT400056932	AT3G13380.1	24064770
AT4G39400.1	PGSC0003DMT400077326	AT3G13380.1	24064770
AT4G39400.1	PGSC0003DMT400050728	AT4G39400.1	15935775
AT4G39400.1	PGSC0003DMT400050728	AT4G39400.1	16473966
AT4G39400.1	PGSC0003DMT400004592	AT5G58220.1	15319482

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g051510.1.1	Tomato	golgi, plasma membrane, vacuole	97.68	97.6
CDY66904	Canola	cytosol, peroxisome, plasma membrane	29.85	75.79
VIT_07s0031g01850.t01	Wine grape	plasma membrane	69.9	69.96
KRH64131	Soybean	plasma membrane	68.08	69.17
KRH53813	Soybean	plasma membrane	67.5	68.75
CDY53185	Canola	plasma membrane	59.2	66.48
CDX72702	Canola	plasma membrane	61.53	65.72
AT4G39400.1	Thale cress	plasma membrane, vacuole	65.17	65.72
CDY41977	Canola	plasma membrane	60.86	65.19
Bra010684.1-P	Field mustard	plasma membrane	63.27	64.99
Bra033615.1-P	Field mustard	plasma membrane	64.1	64.74
CDY12143	Canola	plasma membrane	57.3	64.58
CDX90332	Canola	plasma membrane	59.2	64.56
GSMUA_Achr6P35950_001	Banana	plasma membrane	47.93	64.37
Bra011862.1-P	Field mustard	plasma membrane	63.43	64.07
GSMUA_AchrUn_...	Banana	plasma membrane	42.62	63.93
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	43.86	59.91
Zm00001d043634_P001	Maize	plasma membrane	54.56	59.07
TraesCS3A01G245000.1	Wheat	plasma membrane	54.98	59.04
TraesCS3D01G246500.1	Wheat	plasma membrane	54.89	58.9
EES03532	Sorghum	plasma membrane	54.31	58.48
Zm00001d011721_P001	Maize	plasma membrane	54.23	58.29
Os01t0718300-01	Rice	plasma membrane	53.9	57.98
GSMUA_Achr1P05250_001	Banana	golgi, plasma membrane	39.14	57.49
HORVU3Hr1G068000.2	Barley	plastid	54.48	56.15
TraesCS3B01G275000.1	Wheat	plasma membrane, plastid	54.89	54.98
HORVU3Hr1G068010.1	Barley	plasma membrane	26.04	54.23
HORVU3Hr1G068020.2	Barley	cytosol	37.31	53.44
CDY66903	Canola	extracellular	18.41	53.24
PGSC0003DMT400056932	Potato	plasma membrane	46.35	46.9
PGSC0003DMT400075691	Potato	plasma membrane	43.37	46.57
Zm00001d014769_P001	Maize	cytosol, extracellular, nucleus	10.86	45.8
TraesCS3B01G551200.1	Wheat	plasma membrane	37.48	41.85
TraesCS3B01G550900.1	Wheat	plasma membrane	37.48	41.74
TraesCS3D01G496100.1	Wheat	plasma membrane	37.4	41.68
PGSC0003DMT400046993	Potato	cytosol, extracellular, vacuole	17.0	41.33
OQU86764	Sorghum	plasma membrane	33.75	40.99
TraesCS3A01G490100.1	Wheat	plasma membrane	28.36	38.21
PGSC0003DMT400077326	Potato	mitochondrion	3.48	36.52
PGSC0003DMT400063400	Potato	plasma membrane	30.02	33.12
PGSC0003DMT400037057	Potato	plasma membrane	34.08	32.31
PGSC0003DMT400083089	Potato	plasma membrane	28.86	31.46
PGSC0003DMT400055685	Potato	cytosol, plasma membrane, plastid	30.35	29.61

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102606232	MapMan:11.3.2.1.1	MapMan:18.4.1.10.2	Gene3D:3.30.1490.310	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:ABO27627	ProteinID:ABO27627.1	EMBL:EF471737	GO:GO:0000003	GO:GO:0000166
GO:GO:0001578	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005496	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0008289
GO:GO:0009628	GO:GO:0009647	GO:GO:0009653	GO:GO:0009719	GO:GO:0009729	GO:GO:0009742
GO:GO:0009791	GO:GO:0009908	GO:GO:0009911	GO:GO:0009987	GO:GO:0010224	GO:GO:0010268
GO:GO:0010584	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0030154	GO:GO:0042802	GO:GO:0042803	GO:GO:0046982
GO:GO:0048366	GO:GO:0048657	GO:GO:0060548	GO:GO:1900140	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M1BQQ9	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400019698	PGSC:PGSC0003DMG400019698
EnsemblPlants:PGSC0003DMT400050728	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF220
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002969551	RefSeq:XP_006357355.1
SEG:seg	:	:	:	:	:

Description

BRI1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019698]

Coordinates

chr4:-:55383980..55387974

Molecular Weight (calculated)

132098.0 Da

IEP (calculated)

6.804

GRAVY (calculated)

-0.049

Length

1206 amino acids

Sequence
(BLAST)

0001: MKAHKTVFYQ HPLSLNKLFF VLLLIFFLPP ASPASVNGLF KDSQQLLSFK AALPPTPTLL QNWLPSTDPC SFTGVSCKNS RVSSIDLSNT FLSVDFSLVT
0101: SYLLPLSNLE SLVLKNANLS GSLTSAAKSQ CGVSLDSIDL AENTISGPIS DISSFGVCSN LKSLNLSKNF LDPPGKEILK GATFSLQVLD LSYNNISGFN
0201: LFPWVSSMGF GELEFFSLKG NKLAGSIPEL DFKNLSHLDL SANNFSTVFP SFKDCSNLQH LDLSSNKFYG DIGSSLSSCG KLSFLNLTNN QFVGLVPKLQ
0301: SESLQYLYLR GNDFQGVYPN QLADLCKTVV ELDLSYNNFS GMVPESLGEC SSLELVDISN NNFSGKLPVD TLLKLSNMKT MVLSFNKFVG VLPDSFSNLL
0401: KLETLDVSSN NLTGVIPSGI CKDPMNNLKV LYLQNNLFEG PIPDSLSNCS QLVSLDLSFN YLTRRIPSSL GSLSKLKDLI LWLNQLSGEI PQELMYLQAL
0501: ENLILDFNDL TGPIPASLSN CTKLNWISLS NNQLSGEIPA SLGRLSNLAI LKLGNNSISG NIPAELGNCQ SLIWLDLNTN FLSGSIPPPL FKQSGNIAVA
0601: LLTGKRYVYI KNDGSKECHG AGNLLEFGGI RQEQLGRIST RHPCNFTRVY RGITQPTFNH NGSMIFLDLS YNKLEGSIPK ELGTMYYLSI LNLGHNDLSG
0701: MIPQDLGGLK NVAILDLSYN RFNGPIPNSL TSLTLLGEID LSNNNLSGMI PESAPFDTFP DYRFANNSLC GYPLPLPCSS GPKSDANQHQ KSHRRQASLA
0801: GSVAMGLLFS LFCIFGLIIV AIETKKRRKK KEAALEAYMD GHSHSATANS AWKFTSAREA LSINLAAFEK PLRKLTFADL LEATNGFHND SLVGSGGFGD
0901: VYKAQLKDGS VVAIKKLIHV SGQGDREFTA EMETIGKIKH RNLVPLLGYC KVGEERLLVY EYMKYGSLED VLHDRKKIGI KLNWPARRKI AIGAARGLAF
1001: LHHNCIPHII HRDMKSSNVL LDENLEARVS DFGMARLMSA MDTHLSVSTL AGTPGYVPPE YYQSFRCSTK GDVYSYGVVL LELLTGKQPT DSADFGDNNL
1101: VGWVKLHAKG KITDVFDREL LKEDPSIEIE LLQHLKVACA CLDDRHWKRP TMIQVMAMFK EIQAGSGMDS TSTIGADDVN FSAVEGGIEM GINESIKEGN
1201: ELSKHL

Best Arabidopsis Sequence Match ( AT4G39400.1 )
(BLAST)

0001: MKTFSSFFLS VTTLFFFSFF SLSFQASPSQ SLYREIHQLI SFKDVLPDKN LLPDWSSNKN PCTFDGVTCR DDKVTSIDLS SKPLNVGFSA VSSSLLSLTG
0101: LESLFLSNSH INGSVSGFKC SASLTSLDLS RNSLSGPVTT LTSLGSCSGL KFLNVSSNTL DFPGKVSGGL KLNSLEVLDL SANSISGANV VGWVLSDGCG
0201: ELKHLAISGN KISGDVDVSR CVNLEFLDVS SNNFSTGIPF LGDCSALQHL DISGNKLSGD FSRAISTCTE LKLLNISSNQ FVGPIPPLPL KSLQYLSLAE
0301: NKFTGEIPDF LSGACDTLTG LDLSGNHFYG AVPPFFGSCS LLESLALSSN NFSGELPMDT LLKMRGLKVL DLSFNEFSGE LPESLTNLSA SLLTLDLSSN
0401: NFSGPILPNL CQNPKNTLQE LYLQNNGFTG KIPPTLSNCS ELVSLHLSFN YLSGTIPSSL GSLSKLRDLK LWLNMLEGEI PQELMYVKTL ETLILDFNDL
0501: TGEIPSGLSN CTNLNWISLS NNRLTGEIPK WIGRLENLAI LKLSNNSFSG NIPAELGDCR SLIWLDLNTN LFNGTIPAAM FKQSGKIAAN FIAGKRYVYI
0601: KNDGMKKECH GAGNLLEFQG IRSEQLNRLS TRNPCNITSR VYGGHTSPTF DNNGSMMFLD MSYNMLSGYI PKEIGSMPYL FILNLGHNDI SGSIPDEVGD
0701: LRGLNILDLS SNKLDGRIPQ AMSALTMLTE IDLSNNNLSG PIPEMGQFET FPPAKFLNNP GLCGYPLPRC DPSNADGYAH HQRSHGRRPA SLAGSVAMGL
0801: LFSFVCIFGL ILVGREMRKR RRKKEAELEM YAEGHGNSGD RTANNTNWKL TGVKEALSIN LAAFEKPLRK LTFADLLQAT NGFHNDSLIG SGGFGDVYKA
0901: ILKDGSAVAI KKLIHVSGQG DREFMAEMET IGKIKHRNLV PLLGYCKVGD ERLLVYEFMK YGSLEDVLHD PKKAGVKLNW STRRKIAIGS ARGLAFLHHN
1001: CSPHIIHRDM KSSNVLLDEN LEARVSDFGM ARLMSAMDTH LSVSTLAGTP GYVPPEYYQS FRCSTKGDVY SYGVVLLELL TGKRPTDSPD FGDNNLVGWV
1101: KQHAKLRISD VFDPELMKED PALEIELLQH LKVAVACLDD RAWRRPTMVQ VMAMFKEIQA GSGIDSQSTI RSIEDGGFST IEMVDMSIKE VPEGKL

Arabidopsis Description

BRI1Protein BRASSINOSTEROID INSENSITIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:O22476]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.