Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g102870.1.1 | Tomato | extracellular, plasma membrane | 89.31 | 55.44 |
| PGSC0003DMT400056932 | Potato | plasma membrane | 88.91 | 37.0 |
| OQU92491 | Sorghum | extracellular | 37.9 | 27.17 |
| VIT_19s0015g01890.t01 | Wine grape | plasma membrane | 64.31 | 26.34 |
| Bra034681.1-P | Field mustard | plasma membrane | 57.66 | 26.29 |
| CDY23595 | Canola | plasma membrane | 57.66 | 26.26 |
| CDY43996 | Canola | plasma membrane | 57.46 | 26.19 |
| AT3G13380.1 | Thale cress | plasma membrane | 60.89 | 25.95 |
| KRH56378 | Soybean | plasma membrane | 61.49 | 25.19 |
| KRH62553 | Soybean | plasma membrane | 60.89 | 25.1 |
| AT1G55610.2 | Thale cress | plasma membrane | 58.87 | 25.04 |
| CDY42373 | Canola | plasma membrane | 57.86 | 24.64 |
| Bra030846.1-P | Field mustard | plasma membrane | 57.86 | 24.64 |
| CDY24191 | Canola | cytosol | 26.61 | 24.31 |
| CDY10547 | Canola | plasma membrane | 50.2 | 22.6 |
| Os09t0293500-01 | Rice | plasma membrane | 51.41 | 21.0 |
| HORVU5Hr1G053840.1 | Barley | plasma membrane | 51.41 | 20.99 |
| EER96489 | Sorghum | plasma membrane | 51.21 | 20.92 |
| Zm00001d019983_P001 | Maize | plasma membrane | 51.21 | 20.91 |
| TraesCS5D01G181500.1 | Wheat | plasma membrane | 50.4 | 20.66 |
| TraesCS5B01G174400.1 | Wheat | plasma membrane | 50.2 | 20.49 |
| Os08t0342300-01 | Rice | plasma membrane | 49.6 | 20.26 |
| TraesCS5A01G177300.1 | Wheat | plasma membrane | 49.4 | 20.23 |
| Zm00001d050132_P001 | Maize | plasma membrane | 48.79 | 20.03 |
| GSMUA_Achr2P05500_001 | Banana | plasma membrane | 30.85 | 19.69 |
| GSMUA_Achr9P19060_001 | Banana | plasma membrane | 30.85 | 19.47 |
| PGSC0003DMT400075691 | Potato | plasma membrane | 42.94 | 18.97 |
| PGSC0003DMT400050728 | Potato | golgi, plasma membrane, vacuole | 41.33 | 17.0 |
| PGSC0003DMT400083089 | Potato | plasma membrane | 26.01 | 11.66 |
| PGSC0003DMT400037057 | Potato | plasma membrane | 29.44 | 11.48 |
| PGSC0003DMT400063400 | Potato | plasma membrane | 24.8 | 11.25 |
| PGSC0003DMT400055685 | Potato | cytosol, plasma membrane, plastid | 26.01 | 10.44 |
| PGSC0003DMT400077326 | Potato | mitochondrion | 0.4 | 1.74 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400046993 | EnsemblPlantsGene:PGSC0003DMG400018253 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001611 | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR27000 |
| PANTHER:PTHR27000:SF48 | PFAM:PF13855 | PGSC:PGSC0003DMG400018253 | SEG:seg | SMART:SM00369 | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | TMHMM:TMhelix | UniParc:UPI00029664AF | UniProt:M1BJZ9 | MapMan:35.1 | : |
Description
Leucine rich repeat-type serine/threonine receptor-like kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400018253]
Coordinates
chr1:+:79521260..79522838
Molecular Weight (calculated)
53887.0 Da
IEP (calculated)
6.078
GRAVY (calculated)
0.083
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPSKLLVK LKSLKQLVLA HNQFFDKIPS ELGQSCSTLE EVDLSGNRLT GELPSTFKLC SSLFSLNLGN NELSGDFLHT VISSLTNLRY LYLPFNNITG
101: HVPRSLVNCT KLQVLDLSSN ALIGNVPFEL CLAASGFPLE TMLLASNYLT GTVPKQLEHC RNLRKTDLSF NYLTGSIPLE IWTLPNLSEL VMWANNLTGE
201: IPEGICINGG NLQTLILNNN FISGALPQSI SNCTNLVWVS LSSNQLSGEI PQGIGNLANL AILQLGNNLL TGPIPRGLGK CRNLIWLDLN SNALTGLIPL
301: ELADQAGHVN PGKVSEKQFA FVRNEGGTEC KSAGGLIEFE GIHEERLEIL SMVHLCPSTR IYSGRTMYTF TSNGSMIYLD LSYNSLSGTI PDELPSSSKF
401: GTQQFNWNHS IHLWSDLDVS NNNLSGMIPS GGQLATFSAS RSENNLGLCG VSLPPCGPGN EHHSSSIYHN KPTTIGMVVR IMVSFVSITI IIPLVI
101: HVPRSLVNCT KLQVLDLSSN ALIGNVPFEL CLAASGFPLE TMLLASNYLT GTVPKQLEHC RNLRKTDLSF NYLTGSIPLE IWTLPNLSEL VMWANNLTGE
201: IPEGICINGG NLQTLILNNN FISGALPQSI SNCTNLVWVS LSSNQLSGEI PQGIGNLANL AILQLGNNLL TGPIPRGLGK CRNLIWLDLN SNALTGLIPL
301: ELADQAGHVN PGKVSEKQFA FVRNEGGTEC KSAGGLIEFE GIHEERLEIL SMVHLCPSTR IYSGRTMYTF TSNGSMIYLD LSYNSLSGTI PDELPSSSKF
401: GTQQFNWNHS IHLWSDLDVS NNNLSGMIPS GGQLATFSAS RSENNLGLCG VSLPPCGPGN EHHSSSIYHN KPTTIGMVVR IMVSFVSITI IIPLVI
0001: MKQQWQFLIL CLLVLFLTVD SRGRRLLSDD VNDTALLTAF KQTSIKSDPT NFLGNWRYGS GRDPCTWRGV SCSSDGRVIG LDLRNGGLTG TLNLNNLTAL
0101: SNLRSLYLQG NNFSSGDSSS SSGCSLEVLD LSSNSLTDSS IVDYVFSTCL NLVSVNFSHN KLAGKLKSSP SASNKRITTV DLSNNRFSDE IPETFIADFP
0201: NSLKHLDLSG NNVTGDFSRL SFGLCENLTV FSLSQNSISG DRFPVSLSNC KLLETLNLSR NSLIGKIPGD DYWGNFQNLR QLSLAHNLYS GEIPPELSLL
0301: CRTLEVLDLS GNSLTGQLPQ SFTSCGSLQS LNLGNNKLSG DFLSTVVSKL SRITNLYLPF NNISGSVPIS LTNCSNLRVL DLSSNEFTGE VPSGFCSLQS
0401: SSVLEKLLIA NNYLSGTVPV ELGKCKSLKT IDLSFNALTG LIPKEIWTLP KLSDLVMWAN NLTGGIPESI CVDGGNLETL ILNNNLLTGS LPESISKCTN
0501: MLWISLSSNL LTGEIPVGIG KLEKLAILQL GNNSLTGNIP SELGNCKNLI WLDLNSNNLT GNLPGELASQ AGLVMPGSVS GKQFAFVRNE GGTDCRGAGG
0601: LVEFEGIRAE RLEHFPMVHS CPKTRIYSGM TMYMFSSNGS MIYLDLSYNA VSGSIPLGYG AMGYLQVLNL GHNLLTGTIP DSFGGLKAIG VLDLSHNDLQ
0701: GFLPGSLGGL SFLSDLDVSN NNLTGPIPFG GQLTTFPLTR YANNSGLCGV PLPPCSSGSR PTRSHAHPKK QSIATGMSAG IVFSFMCIVM LIMALYRARK
0801: VQKKEKQREK YIESLPTSGS SSWKLSSVHE PLSINVATFE KPLRKLTFAH LLEATNGFSA DSMIGSGGFG DVYKAKLADG SVVAIKKLIQ VTGQGDREFM
0901: AEMETIGKIK HRNLVPLLGY CKIGEERLLV YEYMKYGSLE TVLHEKTKKG GIFLDWSARK KIAIGAARGL AFLHHSCIPH IIHRDMKSSN VLLDQDFVAR
1001: VSDFGMARLV SALDTHLSVS TLAGTPGYVP PEYYQSFRCT AKGDVYSYGV ILLELLSGKK PIDPEEFGED NNLVGWAKQL YREKRGAEIL DPELVTDKSG
1101: DVELLHYLKI ASQCLDDRPF KRPTMIQVMT MFKELVQVDT ENDSLDEFLL KETPLVEESR DKEP
0101: SNLRSLYLQG NNFSSGDSSS SSGCSLEVLD LSSNSLTDSS IVDYVFSTCL NLVSVNFSHN KLAGKLKSSP SASNKRITTV DLSNNRFSDE IPETFIADFP
0201: NSLKHLDLSG NNVTGDFSRL SFGLCENLTV FSLSQNSISG DRFPVSLSNC KLLETLNLSR NSLIGKIPGD DYWGNFQNLR QLSLAHNLYS GEIPPELSLL
0301: CRTLEVLDLS GNSLTGQLPQ SFTSCGSLQS LNLGNNKLSG DFLSTVVSKL SRITNLYLPF NNISGSVPIS LTNCSNLRVL DLSSNEFTGE VPSGFCSLQS
0401: SSVLEKLLIA NNYLSGTVPV ELGKCKSLKT IDLSFNALTG LIPKEIWTLP KLSDLVMWAN NLTGGIPESI CVDGGNLETL ILNNNLLTGS LPESISKCTN
0501: MLWISLSSNL LTGEIPVGIG KLEKLAILQL GNNSLTGNIP SELGNCKNLI WLDLNSNNLT GNLPGELASQ AGLVMPGSVS GKQFAFVRNE GGTDCRGAGG
0601: LVEFEGIRAE RLEHFPMVHS CPKTRIYSGM TMYMFSSNGS MIYLDLSYNA VSGSIPLGYG AMGYLQVLNL GHNLLTGTIP DSFGGLKAIG VLDLSHNDLQ
0701: GFLPGSLGGL SFLSDLDVSN NNLTGPIPFG GQLTTFPLTR YANNSGLCGV PLPPCSSGSR PTRSHAHPKK QSIATGMSAG IVFSFMCIVM LIMALYRARK
0801: VQKKEKQREK YIESLPTSGS SSWKLSSVHE PLSINVATFE KPLRKLTFAH LLEATNGFSA DSMIGSGGFG DVYKAKLADG SVVAIKKLIQ VTGQGDREFM
0901: AEMETIGKIK HRNLVPLLGY CKIGEERLLV YEYMKYGSLE TVLHEKTKKG GIFLDWSARK KIAIGAARGL AFLHHSCIPH IIHRDMKSSN VLLDQDFVAR
1001: VSDFGMARLV SALDTHLSVS TLAGTPGYVP PEYYQSFRCT AKGDVYSYGV ILLELLSGKK PIDPEEFGED NNLVGWAKQL YREKRGAEIL DPELVTDKSG
1101: DVELLHYLKI ASQCLDDRPF KRPTMIQVMT MFKELVQVDT ENDSLDEFLL KETPLVEESR DKEP
Arabidopsis Description
BRL3Receptor-like protein kinase BRI1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJF3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.