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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g014570.1.1 Tomato nucleus 92.83 93.08
PGSC0003DMT400033459 Potato endoplasmic reticulum 28.55 83.01
PGSC0003DMT400033423 Potato extracellular 13.68 78.63
PGSC0003DMT400057418 Potato extracellular 69.85 69.85
KRH46280 Soybean cytosol 21.25 60.84
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 59.23 58.92
KRH14296 Soybean endoplasmic reticulum 58.03 57.96
KRH73850 Soybean endoplasmic reticulum 57.9 57.9
KRH46281 Soybean extracellular, golgi, plasma membrane 56.84 56.24
KRG98625 Soybean extracellular 53.25 55.54
KRH46279 Soybean extracellular 53.39 55.3
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 55.38 55.01
CDY17323 Canola plasma membrane 55.78 54.69
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 36.26 54.6
AT4G26690.1 Thale cress extracellular, vacuole 54.58 54.15
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 51.53 54.11
AT5G55480.1 Thale cress plasma membrane 54.98 54.05
KRH46282 Soybean extracellular, plasma membrane 54.58 54.01
CDY46687 Canola extracellular, plasma membrane, vacuole 51.39 53.97
CDX92806 Canola extracellular, plasma membrane, vacuole 51.13 53.77
CDY72472 Canola mitochondrion 26.83 53.72
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 53.92 53.63
CDX89312 Canola extracellular, plasma membrane, vacuole 53.92 53.63
CDX94294 Canola extracellular, plasma membrane, vacuole 53.92 53.63
Bra035244.1-P Field mustard plasma membrane 53.92 53.56
CDY61647 Canola extracellular, plasma membrane 53.52 53.38
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 52.59 53.3
EES10974 Sorghum golgi 52.99 53.27
GSMUA_Achr8P25690_001 Banana plasma membrane 53.65 53.16
CDY45656 Canola extracellular, golgi, plasma membrane 46.08 53.14
KRG98622 Soybean extracellular, golgi, plasma membrane 52.86 53.14
HORVU2Hr1G081920.3 Barley plasma membrane 52.46 53.09
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 52.46 53.09
CDY13237 Canola extracellular, plasma membrane, vacuole 53.39 52.96
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 52.32 52.96
TraesCS2D01G332500.1 Wheat golgi 52.32 52.96
CDY60410 Canola extracellular 9.56 52.94
CDY12605 Canola extracellular, vacuole 50.07 52.65
Bra034037.1-P Field mustard extracellular, vacuole 49.67 52.23
Bra028979.1-P Field mustard plasma membrane 52.72 51.83
CDY36746 Canola plasma membrane 52.46 51.57
AT1G66970.2 Thale cress plasma membrane 53.39 51.21
EES05342 Sorghum plasma membrane 50.6 50.6
CDY29432 Canola cytosol, peroxisome 39.97 50.5
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 52.59 50.38
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 50.2 50.33
TraesCS6A01G200600.1 Wheat golgi 49.93 50.27
AT3G20520.1 Thale cress plasma membrane 48.61 50.21
Zm00001d050917_P002 Maize plasma membrane 50.07 50.07
CDY19634 Canola plasma membrane 48.21 50.0
TraesCS6D01G189300.1 Wheat unclear 49.54 49.93
CDY11996 Canola plasma membrane 51.0 49.68
TraesCS6B01G226700.2 Wheat golgi 49.27 49.67
CDY12599 Canola cytosol 26.43 48.77
CDX86807 Canola cytosol 14.87 48.7
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 49.4 48.63
Zm00001d017036_P002 Maize plasma membrane 49.8 48.58
CDX82242 Canola cytosol 28.55 48.53
Bra034040.1-P Field mustard extracellular 8.76 48.53
CDY58867 Canola plasma membrane 46.22 48.2
TraesCS7A01G243900.3 Wheat golgi 48.47 47.46
CDY42328 Canola cytosol 15.94 46.51
TraesCS7B01G147500.1 Wheat unclear 47.68 46.5
Zm00001d025670_P001 Maize mitochondrion 9.16 45.1
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 48.47 45.06
Bra035208.1-P Field mustard extracellular, golgi, plastid 16.33 45.05
Bra035774.1-P Field mustard plasma membrane 48.74 44.92
GSMUA_Achr3P03920_001 Banana cytosol 47.01 44.81
CDX86766 Canola plasma membrane 37.45 44.55
KXG36695 Sorghum plasma membrane 45.15 43.87
CDY36036 Canola plasma membrane 49.4 43.82
Bra001790.1-P Field mustard plasma membrane 48.34 43.54
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.62 43.24
Zm00001d052875_P001 Maize mitochondrion 43.69 42.4
GSMUA_AchrUn_... Banana extracellular 9.16 42.07
Zm00001d031412_P001 Maize extracellular 40.5 40.94
OQU80956 Sorghum cytosol 45.82 38.98
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 49.8 38.9
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.86 38.89
PGSC0003DMT400008461 Potato cytosol 39.31 38.49
PGSC0003DMT400008464 Potato cytosol 37.72 38.48
CDX86765 Canola extracellular, mitochondrion, vacuole 7.7 34.94
AT1G66980.2 Thale cress plasma membrane 51.79 34.0
CDY14478 Canola plasma membrane 52.32 29.98
CDY60415 Canola plasma membrane 45.68 29.01
PGSC0003DMT400010411 Potato extracellular, golgi 10.89 20.97
Protein Annotations
EntrezGene:102592424Gene3D:3.20.20.190MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946
InterPro:IPR030395UniProt:M1AZ72PFAM:PF03009EnsemblPlantsGene:PGSC0003DMG400012855PGSC:PGSC0003DMG400012855EnsemblPlants:PGSC0003DMT400033463
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTM
UniParc:UPI000296F6CARefSeq:XP_006344880.1SEG:seg:::
Description
Glycerophosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400012855]
Coordinates
chr12:+:9573844..9581175
Molecular Weight (calculated)
83732.6 Da
IEP (calculated)
5.606
GRAVY (calculated)
-0.033
Length
753 amino acids
Sequence
(BLAST)
001: MWNLRRLSYL FVLLSCFSVT TQALNNATTK WLTLHGDAPL VIARGGFSGL LPDSSYDAYI MALETSLPNA IIWCDVQLTK DGVGICFPDL KLDNASDIDF
101: YFKNKKSKYL VNGVPTQGWF SIDYNFKDLA PVTLKQGVYS RTSRFDGTQQ SILTVQDVVN QVKPPGLWLN IQHDNFFSQH NLSMRSYIIS LSRSVLINYI
201: SSPEVNFLRS ILARLNSRVT KLVFRFLGQN DVEPSTNQTY GSLLKNLTFI KTFSSGILVP KSYIWPVDNS FYLQPYTSLV LDAHKEGLQI FASEFANDVP
301: FAYNYSYDPT SEYLSFVDNG NFSVDGVLSD FPVTPSATID CFTHLDKNDK PREKLLIITS EGASGDYPGC TDLAYTKAAS DGADVLDCPV QMTKDGIPFC
401: LGSINLIDKT TVFQSLFTNI ASTVPELNIT NGIVTFNLTW DEINSLKPEI TNPWLEFRLY RNPKARNEGN FVSLVDFLTY AKNATTVSGV MISIENAAYL
501: ANQGFGVTDA VREALRNAGY NNQTVKKVMI QSKDSSVLKE FKKTRYELVY RVADDISDIE SSTISEIKSF ASSVILTKNS VFPSESKFLV GKTNVVEKLH
601: SSNLSVYVQR FNNEFVSQAW DFFSDSSVEI NNYFIGAGID GVITDFPRTA ARYRRNRCLR YKVPPLYFSL VSPGVLLQFM SRQSLPPAEA PSPILTESDV
701: VEPPLPPVAK ITPTARNEST ANAAPTSPIG QSSVVAGVFT CCLTILLADL VIF
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.