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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12605 Canola extracellular, vacuole 98.04 98.04
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 76.82 74.02
Bra035244.1-P Field mustard plasma membrane 77.93 73.61
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 75.56 71.47
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 70.81 70.71
AT4G26690.1 Thale cress extracellular, vacuole 74.44 70.22
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 48.04 68.8
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 67.88 64.12
Bra034040.1-P Field mustard extracellular 11.59 61.03
Bra028979.1-P Field mustard plasma membrane 64.94 60.7
PGSC0003DMT400033423 Potato extracellular 9.92 54.2
KRH73850 Soybean endoplasmic reticulum 53.35 50.73
Bra035208.1-P Field mustard extracellular, golgi, plastid 19.27 50.55
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 53.35 50.46
Solyc12g014570.1.1 Tomato nucleus 52.79 50.33
PGSC0003DMT400057418 Potato extracellular 52.65 50.07
KRG98625 Soybean extracellular 50.42 50.0
KRH14296 Soybean endoplasmic reticulum 52.65 50.0
KRH46281 Soybean extracellular, golgi, plasma membrane 52.93 49.8
Solyc07g065120.2.1 Tomato extracellular 52.37 49.8
KRH46279 Soybean extracellular 50.56 49.79
KRH46282 Soybean extracellular, plasma membrane 52.79 49.67
PGSC0003DMT400033463 Potato extracellular, plasma membrane 52.23 49.67
KRH46280 Soybean cytosol 17.6 47.91
GSMUA_Achr8P25690_001 Banana plasma membrane 49.86 46.97
KRG98622 Soybean extracellular, golgi, plasma membrane 48.32 46.19
TraesCS6D01G189300.1 Wheat unclear 47.07 45.11
TraesCS6A01G200600.1 Wheat golgi 47.07 45.05
TraesCS6B01G226700.2 Wheat golgi 46.93 44.98
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.2 44.79
EES05342 Sorghum plasma membrane 47.07 44.75
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 46.37 44.62
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 46.37 44.62
Zm00001d050917_P002 Maize plasma membrane 46.93 44.62
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 46.79 44.61
TraesCS2D01G332500.1 Wheat golgi 46.23 44.49
HORVU2Hr1G081920.3 Barley plasma membrane 45.95 44.22
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.18 43.89
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 46.79 43.79
EES10974 Sorghum golgi 45.39 43.39
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 58.1 43.15
Zm00001d017036_P002 Maize plasma membrane 46.37 43.01
Bra020384.1-P Field mustard extracellular, plasma membrane 44.55 42.2
Bra020395.1-P Field mustard plasma membrane 43.44 41.63
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 43.85 41.59
TraesCS7A01G243900.3 Wheat golgi 44.55 41.48
GSMUA_Achr3P03920_001 Banana cytosol 44.97 40.76
TraesCS7B01G147500.1 Wheat unclear 43.72 40.54
Bra006785.1-P Field mustard extracellular, plasma membrane 43.58 40.26
KXG36695 Sorghum plasma membrane 43.3 40.0
Zm00001d052875_P001 Maize mitochondrion 43.02 39.69
Bra035774.1-P Field mustard plasma membrane 45.25 39.66
Zm00001d022153_P006 Maize extracellular, mitochondrion 42.46 39.12
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.96 38.89
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 43.85 38.77
Bra001790.1-P Field mustard plasma membrane 44.27 37.92
GSMUA_AchrUn_... Banana extracellular 8.66 37.8
Zm00001d031412_P001 Maize extracellular 39.25 37.72
OQU80956 Sorghum cytosol 43.72 35.37
Zm00001d025670_P001 Maize mitochondrion 6.84 32.03
Bra015928.1-P Field mustard extracellular, golgi, vacuole 12.43 22.65
Bra003814.1-P Field mustard golgi 12.01 21.99
Bra009316.1-P Field mustard extracellular, vacuole 11.17 21.51
Bra003813.1-P Field mustard cytosol 12.01 20.87
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra034037EnsemblPlants:Bra034037.1EnsemblPlants:Bra034037.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4EYZ4PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI0002545D1C
SEG:seg:::::
Description
AT4G26690 (E=1e-279) SHV3, MRH5, GPDL2 | SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA02:+:9994057..9997061
Molecular Weight (calculated)
79336.1 Da
IEP (calculated)
7.804
GRAVY (calculated)
-0.156
Length
716 amino acids
Sequence
(BLAST)
001: MRASTVLLSS VVLIQLFAAQ IDAKSSRSPW QTLSGDAPLV IARGGFSGLF PDSSSVAYKF AKQTSVADLF PNRQNFYPVN GVTSQGWFTI DFSLRDLKNA
101: SLIRGIFSRS EKFDGNGYSI LTVQDVSMQI KPESFWLNIQ HDAFYAQHNL SISSFLISAS RTVSIDYISS PKLNFFSKVK GRFWRNEPSF VFQFLGKEEF
201: EPTTKRTYGS ILSNLTYVKT FASGILVPKS YILPLDDKQY LLPPTSLVQD AHKAGLKLYV SGFANDVDIA YNYSFDPVSE YLSFVNNGYF SVDGVLSDFP
301: ITASTSIDCF SHIGRNARKQ MDFLVITKNG ASGDYPGCTD LAYEKAIQDG ADVIDCSVKM SSDGKPFCSS SIDLTQSTMV IQSPFRNRST IIPDISSDPG
401: IYTFNLTWPE IQSLTPAIMN PYRSYNMFRN PNEKNSGRII SLSEFLHLAN KSTSIYGVLI SVEYVVYLRE KQGLDVVKAV LDTLTETGYS NGTSTTKVMI
501: QSTHSSVLVD FKKKSKYETV YKVEETIRDI SDSAIEDIKK FANAVVIGKS SVFPDVGSFV TGQTNVVERL RKSKLPVYVE LFQNEFVSQP YDFCSDATVE
601: INTYITGAGI NGTITEFPLT ASRYKRNQCL GRKETPSYMS PIKPGILLSL ANPRSLPPAE APYPVFTEDD VTESPQPPGT EKSPSSSTNA QTHRPSGQTR
701: LTLSLRLSVF ASLLLL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.