Factsheet for Bra003813.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68195	Canola	peroxisome	99.76	99.76
Bra003814.1-P	Field mustard	golgi	84.22	88.75
Bra015928.1-P	Field mustard	extracellular, golgi, vacuole	77.67	81.42
KRH03139	Soybean	extracellular, golgi	67.48	71.65
Bra009316.1-P	Field mustard	extracellular, vacuole	64.08	70.97
KRH56805	Soybean	nucleus	67.48	70.92
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	66.99	69.87
Solyc06g069470.2.1	Tomato	extracellular	65.53	69.05
PGSC0003DMT400010411	Potato	extracellular, golgi	65.05	68.54
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	64.08	67.87
Os01t0763600-01	Rice	extracellular	63.11	66.5
HORVU3Hr1G073870.1	Barley	extracellular, golgi	62.14	65.47
TraesCS3A01G302700.1	Wheat	extracellular, golgi	61.89	65.22
Zm00001d012677_P012	Maize	golgi	61.41	64.71
TraesCS3B01G333600.1	Wheat	extracellular, golgi	61.41	64.71
TraesCS3D01G299100.1	Wheat	extracellular, golgi	61.41	64.71
EES01511	Sorghum	extracellular, golgi	61.16	64.45
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.33	12.38
Bra020384.1-P	Field mustard	extracellular, plasma membrane	22.09	12.04
Bra034037.1-P	Field mustard	extracellular, vacuole	20.87	12.01
Bra020395.1-P	Field mustard	plasma membrane	21.36	11.78
Bra035244.1-P	Field mustard	plasma membrane	21.6	11.74
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.36	11.61
Bra002676.1-P	Field mustard	extracellular, golgi, plasma membrane	21.12	11.52
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	19.42	11.16
Bra028979.1-P	Field mustard	plasma membrane	20.63	11.1
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.39	11.1
Bra035774.1-P	Field mustard	plasma membrane	21.84	11.02
Bra006785.1-P	Field mustard	extracellular, plasma membrane	20.63	10.97
Bra001790.1-P	Field mustard	plasma membrane	19.66	9.69
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	10.92	9.0
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	19.17	8.2
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	2.67	4.03
Bra034040.1-P	Field mustard	extracellular	0.0	0.0
Os01t0763700-01	Rice	plastid	0.0	0.0
Bra015910.1-P	Field mustard	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:Bra003813.1	EnsemblPlants:Bra003813.1-P	EnsemblPlantsGene:Bra003813	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom
InterPro:IPR017946	InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	PFAM:PF03009
PFscan:PS51704	SUPFAM:SSF51695	UniParc:UPI00025416B9	UniProt:M4CHY0	MapMan:35.1	:

Description

AT1G74210 (E=4e-199) | glycerophosphoryl diester phosphodiesterase family protein

Coordinates

chrA07:-:15182441..15184784

Molecular Weight (calculated)

47272.1 Da

IEP (calculated)

7.790

GRAVY (calculated)

-0.479

Length

412 amino acids

Sequence
(BLAST)

001: MVKKITDIPS ILLNKALKAN LDSPDFEPLQ RDATKKDKET LRTPYPLPGV GAKGGKLPIQ TSRPYNIAHR GSNGEIPEET AAAYLRAIEE GTDFIETDVL
101: STKDGALICF HDVILDETTN VASHKEFFDR KRTYEVQGFN ITGFFTFDFT LKELKKLRTK QRYSFRDQQY NGKYPIITFE EFITIARDAP RVVGIYPEIK
201: NPVLMNQHVK WPGGKRFEDK VVETLKKYGY GGSYLSKKWL KRPLFIQSFA PSSLVYITKL TDSPKVLLID DVTVLTEDTN QTYAEITSDV YFNYIKQYVV
301: GIGPWKDTVV PVNNNYIQAP TDLVKRAHAH NLQVHPYTYR NENEFLHLNF SQDPYKEYEY WINEIGVDGL FTDFTGSLHN YQEWTSPLSE TSKSPRQLLS
401: QIASLVLPYA KA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.