Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 76.09 | 74.94 |
| Solyc06g069470.2.1 | Tomato | extracellular | 75.32 | 74.94 |
| KRH03139 | Soybean | extracellular, golgi | 74.04 | 74.23 |
| PGSC0003DMT400010411 | Potato | extracellular, golgi | 74.55 | 74.17 |
| KRH56805 | Soybean | nucleus | 74.55 | 73.98 |
| Bra009316.1-P | Field mustard | extracellular, vacuole | 69.67 | 72.85 |
| Zm00001d012677_P012 | Maize | golgi | 72.75 | 72.38 |
| TraesCS3A01G302700.1 | Wheat | extracellular, golgi | 72.75 | 72.38 |
| TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 72.49 | 72.12 |
| TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 72.49 | 72.12 |
| Os01t0763600-01 | Rice | extracellular | 72.49 | 72.12 |
| HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 72.49 | 72.12 |
| CDX99041 | Canola | extracellular | 69.15 | 72.12 |
| CDX69980 | Canola | extracellular, golgi, vacuole | 68.89 | 72.04 |
| EES01511 | Sorghum | extracellular, golgi | 71.72 | 71.36 |
| AT5G08030.2 | Thale cress | golgi | 70.44 | 70.8 |
| CDX73068 | Canola | extracellular | 70.18 | 69.11 |
| AT1G74210.1 | Thale cress | extracellular | 69.41 | 68.88 |
| Bra015928.1-P | Field mustard | extracellular, golgi, vacuole | 68.64 | 67.94 |
| Bra003814.1-P | Field mustard | golgi | 68.12 | 67.77 |
| CDY11071 | Canola | extracellular, golgi | 67.61 | 67.26 |
| CDX68196 | Canola | golgi | 67.35 | 66.0 |
| Bra003813.1-P | Field mustard | cytosol | 67.87 | 64.08 |
| CDX68195 | Canola | peroxisome | 67.61 | 63.84 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 68.89 | 63.81 |
| CDX85815 | Canola | mitochondrion | 43.44 | 58.48 |
| CDX85814 | Canola | extracellular | 29.05 | 57.65 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 19.28 | 13.18 |
| GSMUA_Achr1P16520_001 | Banana | extracellular, plasma membrane | 22.88 | 11.85 |
| GSMUA_Achr8P25690_001 | Banana | plasma membrane | 23.14 | 11.84 |
| GSMUA_Achr9P12610_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 22.62 | 11.2 |
| GSMUA_Achr4P09430_001 | Banana | extracellular | 19.28 | 10.9 |
| GSMUA_Achr3P03920_001 | Banana | cytosol | 19.54 | 9.62 |
| GSMUA_AchrUn_... | Banana | extracellular | 1.03 | 2.44 |
| Os01t0763700-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:GP_PDE_dom | EnsemblPlantsGene:GSMUA_Achr6G34970_001 | EnsemblPlants:GSMUA_Achr6P34970_001 |
| EnsemblPlants:GSMUA_Achr6T34970_001 | InterPro:IPR017946 | InterPro:IPR030395 | UniProt:M0TCU0 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl |
| PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF5 | SUPFAM:SSF51695 | SignalP:SignalP-noTM | UniParc:UPI000294F756 |
Description
Putative Glycerophosphoryl diester phosphodiesterase [Source:GMGC_GENE;Acc:GSMUA_Achr6G34970_001]
Coordinates
chr6:-:33345398..33350607
Molecular Weight (calculated)
44841.9 Da
IEP (calculated)
5.399
GRAVY (calculated)
-0.366
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLWIASLL LFSLFNLTVG RPIYPLPSKQ DNKVKQPLQT SRPYNIAHRG SNGEIPEETA AAYMRAIEEG ADFIETDILA SKDGSLICFH DVILDDTTDI
101: AKHKEFADRK RTYEVQGSNM TGYFVVDFTL DELKSLRVKQ RYPFRDQQYN GKFSIITFEE FIAIALDANR IVGIYPEIKN PVFINQHVKW PHGKKFEDKF
201: VGLLLKYGYK GAYMSEDWLK QPVFIQSFAP TSLIYISNMT DSPKIFLIDD FTMPTQDTNQ SYWEITSDSF LEYIRSYVVG IGPWKDTIVP PENNHLTTPS
301: DLVDRAHAHN LQVHPYTYRN ENSFLHFDFH QDPYSEYEYW LNKIGVDGLF TDFTGSLHKY QEWAAASGTD EKSAYGLLHK IALMISSYD
101: AKHKEFADRK RTYEVQGSNM TGYFVVDFTL DELKSLRVKQ RYPFRDQQYN GKFSIITFEE FIAIALDANR IVGIYPEIKN PVFINQHVKW PHGKKFEDKF
201: VGLLLKYGYK GAYMSEDWLK QPVFIQSFAP TSLIYISNMT DSPKIFLIDD FTMPTQDTNQ SYWEITSDSF LEYIRSYVVG IGPWKDTIVP PENNHLTTPS
301: DLVDRAHAHN LQVHPYTYRN ENSFLHFDFH QDPYSEYEYW LNKIGVDGLF TDFTGSLHKY QEWAAASGTD EKSAYGLLHK IALMISSYD
001: MQCGRWRNFS SSNSVMAFKY LLPLLLLSLL VANCASRPLY RLPSEAKHAT KKPLQTSRPY NLAHRGSNGE LPEETAPAYM RAIEEGADFI ETDILSSKDG
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
Arabidopsis Description
PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.