Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 6
- vacuole 3
- plasma membrane 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015928.1-P | Field mustard | extracellular, golgi, vacuole | 86.48 | 86.26 |
| CDX73068 | Canola | extracellular | 86.73 | 86.08 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 84.69 | 79.05 |
| KRH56805 | Soybean | nucleus | 71.94 | 71.94 |
| KRH03139 | Soybean | extracellular, golgi | 70.92 | 71.65 |
| Solyc06g069470.2.1 | Tomato | extracellular | 70.15 | 70.33 |
| AT5G08030.2 | Thale cress | golgi | 69.39 | 70.28 |
| PGSC0003DMT400010411 | Potato | extracellular, golgi | 69.9 | 70.08 |
| VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 70.15 | 69.62 |
| GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 68.88 | 69.41 |
| TraesCS3A01G302700.1 | Wheat | extracellular, golgi | 65.56 | 65.73 |
| HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 65.56 | 65.73 |
| TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 65.31 | 65.47 |
| TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 65.31 | 65.47 |
| Os01t0763600-01 | Rice | extracellular | 65.31 | 65.47 |
| EES01511 | Sorghum | extracellular, golgi | 65.05 | 65.22 |
| Zm00001d012677_P012 | Maize | golgi | 64.8 | 64.96 |
| AT5G58170.1 | Thale cress | extracellular, plasma membrane | 22.19 | 11.6 |
| AT3G20520.1 | Thale cress | plasma membrane | 21.17 | 11.39 |
| AT1G66970.2 | Thale cress | plasma membrane | 22.7 | 11.34 |
| AT5G58050.1 | Thale cress | extracellular, plasma membrane | 21.68 | 11.29 |
| AT4G26690.1 | Thale cress | extracellular, vacuole | 21.68 | 11.2 |
| AT5G55480.1 | Thale cress | plasma membrane | 21.43 | 10.97 |
| AT1G66980.2 | Thale cress | plasma membrane | 21.43 | 7.32 |
| Os01t0763700-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | EntrezGene:843761 | UniProt:A0A178W3R5 | ProteinID:AAG52406.1 | ProteinID:AEE35566.1 |
| ArrayExpress:AT1G74210 | EnsemblPlantsGene:AT1G74210 | RefSeq:AT1G74210 | TAIR:AT1G74210 | RefSeq:AT1G74210-TAIR-G | EnsemblPlants:AT1G74210.1 |
| TAIR:AT1G74210.1 | EMBL:AY064037 | EMBL:AY086343 | EMBL:AY142654 | Unigene:At.75098 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 | GO:GO:0006071 | GO:GO:0006629 | GO:GO:0008081 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008889 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0030312 |
| InterPro:GP_PDE_dom | InterPro:IPR017946 | InterPro:IPR030395 | RefSeq:NP_177561.1 | ProteinID:OAP13107.1 | PFAM:PF03009 |
| InterPro:PLC-like_Pdiesterase_TIM-brl | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51704 |
| PANTHER:PTHR43620 | PANTHER:PTHR43620:SF5 | UniProt:Q9C907 | SUPFAM:SSF51695 | SignalP:SignalP-noTM | UniParc:UPI0000048479 |
Description
GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
Coordinates
chr1:+:27910314..27912941
Molecular Weight (calculated)
45023.8 Da
IEP (calculated)
7.107
GRAVY (calculated)
-0.328
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.