Factsheet for Bra015928.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	96.95	90.71
AT1G74210.1	Thale cress	extracellular	86.26	86.48
Bra003814.1-P	Field mustard	golgi	83.46	83.89
Bra003813.1-P	Field mustard	cytosol	81.42	77.67
KRH03139	Soybean	extracellular, golgi	69.72	70.62
KRH56805	Soybean	nucleus	69.97	70.15
Bra009316.1-P	Field mustard	extracellular, vacuole	65.39	69.09
PGSC0003DMT400010411	Potato	extracellular, golgi	68.45	68.8
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	67.94	68.64
Solyc06g069470.2.1	Tomato	extracellular	68.19	68.54
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	68.19	67.85
TraesCS3A01G302700.1	Wheat	extracellular, golgi	65.39	65.73
HORVU3Hr1G073870.1	Barley	extracellular, golgi	65.14	65.47
TraesCS3B01G333600.1	Wheat	extracellular, golgi	65.14	65.47
TraesCS3D01G299100.1	Wheat	extracellular, golgi	65.14	65.47
EES01511	Sorghum	extracellular, golgi	64.38	64.71
Zm00001d012677_P012	Maize	golgi	64.12	64.45
Os01t0763600-01	Rice	extracellular	64.12	64.45
Bra034037.1-P	Field mustard	extracellular, vacuole	22.65	12.43
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.9	12.11
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.9	11.87
Bra035244.1-P	Field mustard	plasma membrane	22.65	11.74
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.37	11.72
Bra020395.1-P	Field mustard	plasma membrane	21.88	11.51
Bra035774.1-P	Field mustard	plasma membrane	23.92	11.51
Bra020384.1-P	Field mustard	extracellular, plasma membrane	21.88	11.38
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.88	11.36
Bra028979.1-P	Field mustard	plasma membrane	22.14	11.36
Bra002676.1-P	Field mustard	extracellular, golgi, plasma membrane	21.37	11.13
Bra006785.1-P	Field mustard	extracellular, plasma membrane	21.63	10.97
Bra001790.1-P	Field mustard	plasma membrane	20.87	9.81
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	11.7	9.2
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.87	8.51
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	2.8	4.03
Os01t0763700-01	Rice	plastid	0.0	0.0
Bra034040.1-P	Field mustard	extracellular	0.0	0.0
Bra015910.1-P	Field mustard	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EnsemblPlantsGene:Bra015928	EnsemblPlants:Bra015928.1	EnsemblPlants:Bra015928.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom
InterPro:IPR017946	InterPro:IPR030395	UniProt:M4DHF1	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704
PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI0002541E16	:

Description

AT1G74210 (E=1e-199) | glycerophosphoryl diester phosphodiesterase family protein

Coordinates

chrA07:+:20184368..20186734

Molecular Weight (calculated)

45082.8 Da

IEP (calculated)

8.603

GRAVY (calculated)

-0.393

Length

393 amino acids

Sequence
(BLAST)

001: MILTKCLPLI WLSLVTLCAG RTLYQRPGKG VKDDASKQPI QTSRPYNIAH RGSNGEIPEE TKAAYLKAIE EGTDFIETDI LSSKDGVLIC FHDVILDLTT
101: DVASRKEFAG RNRTYDVQGF KIPGFFTFDF TLKELKTLRT KQRYAFRDQQ YNGKYPIITF EEFLAIAQDA PRVVGIYPEI KNPVLMNQHV KWPGGKRFED
201: KVVETLKKHG YGGAYLSKNW LNKPLFIQSF APSSLVYISN LTDSPKVLLI DDVIRPTQDT NQTYAEITSD AYFTYIKEYV VGIGPWKDTI VPVTNNYMLT
301: PTDLVKRAHA HKLQVHPYTY RNENQFLHFN FSQDPYKEYE YWIKEIGVDG LFTDFTGSLH NYQEWASPLP ETSKSTRQLL SHIASLVRPY AKA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.