Factsheet for Bra009316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69980	Canola	extracellular, golgi, vacuole	98.39	98.39
CDX99041	Canola	extracellular	98.12	97.86
AT5G08030.2	Thale cress	golgi	89.52	86.05
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	74.46	70.13
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	72.85	69.67
KRH03139	Soybean	extracellular, golgi	71.24	68.3
KRH56805	Soybean	nucleus	71.77	68.11
Solyc06g069470.2.1	Tomato	extracellular	71.24	67.77
Bra003814.1-P	Field mustard	golgi	70.97	67.52
Zm00001d012677_P012	Maize	golgi	70.7	67.26
PGSC0003DMT400010411	Potato	extracellular, golgi	70.43	67.01
EES01511	Sorghum	extracellular, golgi	70.43	67.01
TraesCS3A01G302700.1	Wheat	extracellular, golgi	69.89	66.5
HORVU3Hr1G073870.1	Barley	extracellular, golgi	69.89	66.5
TraesCS3D01G299100.1	Wheat	extracellular, golgi	69.35	65.98
TraesCS3B01G333600.1	Wheat	extracellular, golgi	69.35	65.98
Os01t0763600-01	Rice	extracellular	68.82	65.47
Bra015928.1-P	Field mustard	extracellular, golgi, vacuole	69.09	65.39
Bra003813.1-P	Field mustard	cytosol	70.97	64.08
Bra034037.1-P	Field mustard	extracellular, vacuole	21.51	11.17
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.24	11.02
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.51	10.77
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.51	10.57
Bra035244.1-P	Field mustard	plasma membrane	21.24	10.42
Bra020384.1-P	Field mustard	extracellular, plasma membrane	20.97	10.32
Bra020395.1-P	Field mustard	plasma membrane	20.7	10.31
Bra002676.1-P	Field mustard	extracellular, golgi, plasma membrane	20.7	10.2
Bra028979.1-P	Field mustard	plasma membrane	20.97	10.18
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.7	10.16
Bra006785.1-P	Field mustard	extracellular, plasma membrane	20.7	9.94
Bra035774.1-P	Field mustard	plasma membrane	21.77	9.91
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	12.1	9.0
Bra001790.1-P	Field mustard	plasma membrane	18.55	8.25
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.7	7.99
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	3.76	5.13
Os01t0763700-01	Rice	plastid	0.0	0.0
Bra034040.1-P	Field mustard	extracellular	0.0	0.0
Bra015910.1-P	Field mustard	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EnsemblPlantsGene:Bra009316	EnsemblPlants:Bra009316.1	EnsemblPlants:Bra009316.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395	UniProt:M4CYL9	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI0002543D3F
SEG:seg	:	:	:	:	:

Description

AT5G08030 (E=2e-186) | glycerophosphoryl diester phosphodiesterase family protein

Coordinates

chrA10:-:16136666..16138357

Molecular Weight (calculated)

42342.5 Da

IEP (calculated)

5.850

GRAVY (calculated)

-0.302

Length

372 amino acids

Sequence
(BLAST)

001: MVVKCCLPLL LLSLLIAECA SRPLYTLPSL AKAGTKKPLQ TSRPFNVAHR GANGEFPEET APAYMRAIEE GADFIESDIL STKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LEELKTLGAK QRYPFRDQQY NGKFPIITLD EYIAIALDAP RVVGIYPEIK NPVFINQQVK WADGKKFEDK
201: IVATLKKYGY KGSYMSKDWL KQPIFIQSFA ATSLVYISNM TDSPKVFLID DVTILTEDTN KTYAEITSDK YLDYIKPYVV GIGPWKDTIV PVDNNRLTTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHSGF HQDAYLEYDY WINKIGVDGL FTDFTGSLHN FQELTAPLPK LQ

Best Arabidopsis Sequence Match ( AT5G08030.2 )
(BLAST)

001: MQCGRWRNFS SSNSVMAFKY LLPLLLLSLL VANCASRPLY RLPSEAKHAT KKPLQTSRPY NLAHRGSNGE LPEETAPAYM RAIEEGADFI ETDILSSKDG
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.