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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 3
  • plasma membrane 2
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 100.0 21.47
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 0.0 0.0
Bra035774.1-P Field mustard plasma membrane 0.0 0.0
Bra035244.1-P Field mustard plasma membrane 0.0 0.0
Bra035208.1-P Field mustard extracellular, golgi, plastid 0.0 0.0
Bra034040.1-P Field mustard extracellular 0.0 0.0
Bra034037.1-P Field mustard extracellular, vacuole 0.0 0.0
Bra028979.1-P Field mustard plasma membrane 0.0 0.0
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 0.0 0.0
Bra020395.1-P Field mustard plasma membrane 0.0 0.0
Bra020384.1-P Field mustard extracellular, plasma membrane 0.0 0.0
Bra001790.1-P Field mustard plasma membrane 0.0 0.0
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 0.0 0.0
Bra015928.1-P Field mustard extracellular, golgi, vacuole 0.0 0.0
Bra009316.1-P Field mustard extracellular, vacuole 0.0 0.0
Bra006785.1-P Field mustard extracellular, plasma membrane 0.0 0.0
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 0.0 0.0
Bra003814.1-P Field mustard golgi 0.0 0.0
Bra003813.1-P Field mustard cytosol 0.0 0.0
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 0.0 0.0
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 0.0 0.0
Protein Annotations
EnsemblPlants:Bra015910.1EnsemblPlants:Bra015910.1-PEnsemblPlantsGene:Bra015910GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DUF962ncoils:CoilPANTHER:PTHR28026PFAM:PF06127SEG:segTMHMM:TMhelix
UniParc:UPI0002541E7DUniProt:M4DHD3MapMan:35.2:::
Description
AT1G74440 (E=2e-100) | unknown protein
Coordinates
chrA07:-:20263672..20264919
Molecular Weight (calculated)
23553.0 Da
IEP (calculated)
8.579
GRAVY (calculated)
0.355
Length
207 amino acids
Sequence
(BLAST)
001: MSNRIGLLDL EKHFAFYGAY HSNRVNIIIH TLFVWPNVFA TLLFLYSTQP ILDRSYLGFI EALTFDGVLR LDTGFILTVI YAVFYIYLDN KSGVLAALLC
101: FSCWIGSSFL AARLGHSLTL KVGVASQLLC WTGQFLGHGL FEKRAPALLD NLVQAFLMGP YFVLLEVLQS GFGYEPYPGF KSRVDCKIEN DIKEWNEEKL
201: KKKKKLM
Best Arabidopsis Sequence Match ( AT1G74440.2 )
(BLAST)
001: MSNRIGLLDL EKHFAFYGAY HSNPINIIIH TLFVWPNVFA TLLFLYSTPP ILDHSQLGFL KSLTFDGVLR LDIGFTLTVT YAVFYICLDK KSGVLAALLC
101: FSCWIGSSFL AARLGHSLTL KVGVASQLLC WTGQFLGHGL FEKRAPALLD NLLQAFLMGP FFVLLEVLQS VFGYEPYPGF KARVDSKIES GIKEWREKKK
201: QQQMKKVT
Arabidopsis Description
ER membrane protein, putative (DUF962) [Source:UniProtKB/TrEMBL;Acc:Q9CA70]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.