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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32730 Canola plasma membrane 98.66 98.93
Bra006785.1-P Field mustard extracellular, plasma membrane 87.68 84.52
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 85.01 84.11
Bra020384.1-P Field mustard extracellular, plasma membrane 80.99 80.03
VIT_11s0206g00140.t01 Wine grape plasma membrane 61.45 61.2
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, peroxisome 43.91 57.65
GSMUA_Achr4P09430_001 Banana extracellular 52.08 56.54
KRH20083 Soybean plasma membrane 53.55 52.36
KRH03081 Soybean extracellular, plasma membrane 52.74 51.57
Os02t0187400-01 Rice plasma membrane 46.85 49.79
Zm00001d015609_P002 Maize plasma membrane 50.33 49.41
KXG29647 Sorghum extracellular, plasma membrane 49.67 49.27
TraesCS6A01G174100.1 Wheat extracellular, plasma membrane, vacuole 49.0 48.87
TraesCS6D01G163200.1 Wheat extracellular, plasma membrane 48.86 48.73
TraesCS6B01G202700.1 Wheat extracellular, plasma membrane 48.46 48.33
EER90089 Sorghum extracellular, plasma membrane 47.66 46.78
PGSC0003DMT400008464 Potato cytosol 45.52 46.07
TraesCS1A01G353200.1 Wheat extracellular, plasma membrane 46.85 45.99
TraesCS1D01G357000.1 Wheat extracellular, plasma membrane 46.72 45.86
TraesCS1B01G368600.1 Wheat extracellular, plasma membrane 46.72 45.86
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 30.52 45.6
PGSC0003DMT400008461 Potato cytosol 46.85 45.51
Solyc02g014490.2.1 Tomato unclear 43.91 45.43
Solyc02g014530.2.1 Tomato unclear 47.39 44.53
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 43.91 44.15
Bra035244.1-P Field mustard plasma membrane 44.31 43.67
Bra034037.1-P Field mustard extracellular, vacuole 41.63 43.44
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 43.64 43.06
HORVU1Hr1G080970.22 Barley extracellular, plasma membrane 46.32 42.61
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 43.11 42.48
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 40.7 42.4
Bra028979.1-P Field mustard plasma membrane 41.5 40.47
Bra034040.1-P Field mustard extracellular 6.56 36.03
Bra035774.1-P Field mustard plasma membrane 39.22 35.86
Bra001790.1-P Field mustard plasma membrane 38.55 34.45
Bra035208.1-P Field mustard extracellular, golgi, plastid 12.05 32.97
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 39.36 30.5
Bra003814.1-P Field mustard golgi 11.65 22.25
Bra015928.1-P Field mustard extracellular, golgi, vacuole 11.51 21.88
Bra003813.1-P Field mustard cytosol 11.78 21.36
Bra009316.1-P Field mustard extracellular, vacuole 10.31 20.7
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra020395EnsemblPlants:Bra020395.1EnsemblPlants:Bra020395.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395
UniProt:M4DV52PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF3
SUPFAM:SSF51695SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002545CF9SEG:seg:
Description
AT5G58050 (E=0.0) SVL4 | SVL4 (SHV3-LIKE 4); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA02:+:6538106..6540949
Molecular Weight (calculated)
80274.5 Da
IEP (calculated)
5.106
GRAVY (calculated)
0.021
Length
747 amino acids
Sequence
(BLAST)
001: MLRFFIFFFL FIHSCVAAPK IPAAVPATKW LTLNGQEPAV VARGGFSGLF PESSASANDL AISTSSPGLT MLCNLQMTKD GVGLCLSDIR LDNAPTISTL
101: FPKAQKTYKV YGQDLKGWFV LDYSADTIFS NVSLVQNIFS RPSIFDGQMP VSAVEDVLGI KPPKFWLSVQ YDAFYMEHKL SAAAYLRSLR FRGITFISSP
201: EIGFLKSIGM DALRAKTKLI FEFKDPEAIE PTTNKKYSEI LKNLAAIKAF ASGVLVPKDY IWALDSANYL KPASTFVADA HKAGLEVYAS GFANDYRTSY
301: NYSYDPSAEY LQFVDNGQFS VDGFITDFPP TASQAISCLS HQKGNLPKIG NALVITHNGA SGEYPGCTDL AYQKAVDDGA DVIDCSVQMS KDGMAFCHDS
401: ADITATTNAM TTFMSRATSV PEIQPTNGIF SFDLTWAEIQ SLKPQIQSPF STSGGFQRNP ANKNAGKFMT LVDFLEFGKA KAVTGVLINI QATSKKGLGI
501: VDAVKSALTN STLDKQSTQK VLIQSDDSSV LSSFEAVPPY TRVLSIDKEI GDAPKPSVDE IKKHAEAVNL KRSSLDTISE SFATGKTNVV EEMHKGNISV
601: YVSVLRNEYI SIAFDYFSDP TVELATFIAG NGVDGVITEF PATATRYLRS PCSDLNKDQP YAILPAEAGA LLSVAAKEAQ PPAIAPSPPL DAKDVIDPPL
701: PPVANIGSSD GEAPPHAPPH SGTIATSANL GLSLLAILAL GVLFAVE
Best Arabidopsis Sequence Match ( AT5G58170.1 )
(BLAST)
001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
Arabidopsis Description
GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.