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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46687 Canola extracellular, plasma membrane, vacuole 99.86 99.86
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 85.77 81.24
AT4G26690.1 Thale cress extracellular, vacuole 81.45 76.94
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 51.46 73.8
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 74.76 72.14
Bra035244.1-P Field mustard plasma membrane 75.45 71.37
Bra034037.1-P Field mustard extracellular, vacuole 70.71 70.81
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 72.11 68.21
Bra034040.1-P Field mustard extracellular 12.41 65.44
Bra028979.1-P Field mustard plasma membrane 68.62 64.23
PGSC0003DMT400033423 Potato extracellular 10.46 57.25
Bra035208.1-P Field mustard extracellular, golgi, plastid 21.48 56.41
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 56.62 53.63
PGSC0003DMT400057418 Potato extracellular 55.79 53.12
Solyc07g065120.2.1 Tomato extracellular 55.37 52.72
KRH73850 Soybean endoplasmic reticulum 55.37 52.72
KRH14296 Soybean endoplasmic reticulum 54.95 52.25
Solyc12g014570.1.1 Tomato nucleus 54.67 52.2
KRH46281 Soybean extracellular, golgi, plasma membrane 54.81 51.64
PGSC0003DMT400033463 Potato extracellular, plasma membrane 54.11 51.53
KRH46279 Soybean extracellular 51.46 50.76
KRG98625 Soybean extracellular 51.05 50.69
KRH46282 Soybean extracellular, plasma membrane 53.42 50.33
PGSC0003DMT400033459 Potato endoplasmic reticulum 18.13 50.19
KRG98622 Soybean extracellular, golgi, plasma membrane 50.49 48.33
GSMUA_Achr8P25690_001 Banana plasma membrane 50.21 47.37
GSMUA_AchrUn_... Banana extracellular 10.46 45.73
TraesCS6A01G200600.1 Wheat golgi 47.7 45.72
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 47.42 45.7
HORVU2Hr1G081920.3 Barley plasma membrane 47.42 45.7
TraesCS6D01G189300.1 Wheat unclear 47.42 45.52
TraesCS2D01G332500.1 Wheat golgi 47.14 45.43
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 47.14 45.43
TraesCS6B01G226700.2 Wheat golgi 47.0 45.11
EES10974 Sorghum golgi 47.0 44.99
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 60.39 44.92
Zm00001d050917_P002 Maize plasma membrane 47.0 44.75
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 46.86 44.74
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.95 44.66
EES05342 Sorghum plasma membrane 46.86 44.62
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.56 44.58
KRH46280 Soybean cytosol 16.32 44.49
Zm00001d017036_P002 Maize plasma membrane 46.58 43.26
TraesCS7A01G243900.3 Wheat golgi 46.16 43.04
TraesCS7B01G147500.1 Wheat unclear 45.75 42.49
Bra020384.1-P Field mustard extracellular, plasma membrane 44.63 42.33
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 44.21 41.99
Zm00001d025670_P001 Maize mitochondrion 8.93 41.83
KXG36695 Sorghum plasma membrane 45.19 41.81
Bra035774.1-P Field mustard plasma membrane 47.56 41.74
Zm00001d052875_P001 Maize mitochondrion 44.63 41.24
Bra020395.1-P Field mustard plasma membrane 42.4 40.7
Bra006785.1-P Field mustard extracellular, plasma membrane 43.93 40.65
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.89 40.62
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.93 40.54
GSMUA_Achr3P03920_001 Banana cytosol 43.93 39.87
Bra001790.1-P Field mustard plasma membrane 46.03 39.47
Zm00001d031412_P001 Maize extracellular 40.86 39.33
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.95 38.89
OQU80956 Sorghum cytosol 45.61 36.95
Bra015928.1-P Field mustard extracellular, golgi, vacuole 11.72 21.37
Bra009316.1-P Field mustard extracellular, vacuole 11.02 21.24
Bra003814.1-P Field mustard golgi 11.44 20.97
Bra003813.1-P Field mustard cytosol 11.16 19.42
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra019092EnsemblPlants:Bra019092.1EnsemblPlants:Bra019092.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4DRE9PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI0002541254
SEG:seg:::::
Description
AT4G26690 (E=9e-234) SHV3, MRH5, GPDL2 | SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA03:-:26366141..26369311
Molecular Weight (calculated)
77973.6 Da
IEP (calculated)
4.929
GRAVY (calculated)
-0.038
Length
717 amino acids
Sequence
(BLAST)
001: MRGLLLLCGV VLIQLLAAQT DAQGSKSKWQ TLTGFSPRVI ARGGFSGLFP DSSIDAYNFA MLTSVEDVVL WCDLQLTKDG AGICFPGLTM SNASNIEAAY
101: PNRTNTYLVN GVSTQGWFTI DFSLKDLNKV NLIRGILSRS ERFDGNGYSI LTVQDVNTEL KPQGLWLNVQ HEAFYAQHNL SMTTFLTTAS KTVIIDFISS
201: PEVNFFKKIA GRFGRILVPK SYVLPLDDKQ YLLPSTSLVQ DAHKAGLEVF VSGFANDVDI AHDYSYDPVS EYLSFVDNGN FSVDGVLSDF PISASASVEC
301: FSHMGRNATK QVDFLVISKN GASGDYPGCT DLAYAKAIKD GADVIDCSVQ MSSDGTPFCS SSIDLGKTTM VAQTPLRNRS TNVPEISSLG GIYTFSLTWP
401: EIQTLTPAIS NPYRTYNMFR NPNERNAGKL VSLSDFLNLA KNSTSLSGVL ISVENAAYLR ENQGLDVVKA VLDTLTETGY TNITTKKVMI QSTNSSVLLD
501: FKKQSRYETV YKVEETIRDI LDSAIEDIKR FASAVVIVKS SVFPDSEGFV TGQTNVVERL QKSQLPVYVE LFQNEFVSQP YDFFSDANVE INSYVTGAGV
601: NGTVTEFPFT AARYRRNRCL GSKETPPYMA PVQPGGLLQV VNHASLPPAE APNPVFTDAD VTEPPLPPVT AKAPTSTTPG TPSKPSTNAP APSGQTRLTL
701: SLLLSVFPMA IASLLLL
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.