Factsheet for Solyc07g065120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

plastid: 20363867
extracellular: 22892874
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057418	Potato	extracellular	94.42	94.42
Solyc12g014570.1.1	Tomato	nucleus	67.99	68.18
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	60.42	60.11
KRH46280	Soybean	cytosol	20.45	58.56
KRH14296	Soybean	endoplasmic reticulum	57.24	57.16
KRH73850	Soybean	endoplasmic reticulum	56.97	56.97
CDY60410	Canola	extracellular	10.23	56.62
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.18	55.8
KRH46281	Soybean	extracellular, golgi, plasma membrane	56.18	55.58
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.72	55.37
CDY46687	Canola	extracellular, plasma membrane, vacuole	52.59	55.23
AT5G55480.1	Thale cress	plasma membrane	56.04	55.09
CDY17323	Canola	plasma membrane	56.18	55.08
CDX92806	Canola	extracellular, plasma membrane, vacuole	52.32	55.03
CDY61647	Canola	extracellular, plasma membrane	55.11	54.97
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.18	54.91
CDX94294	Canola	extracellular, plasma membrane, vacuole	55.11	54.82
KRG98625	Soybean	extracellular	52.46	54.71
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.98	54.69
KRH46279	Soybean	extracellular	52.72	54.61
CDX89312	Canola	extracellular, plasma membrane, vacuole	54.85	54.56
AT4G26690.1	Thale cress	extracellular, vacuole	54.85	54.41
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	36.12	54.4
Bra035244.1-P	Field mustard	plasma membrane	54.45	54.09
CDY45656	Canola	extracellular, golgi, plasma membrane	46.88	54.06
KRH46282	Soybean	extracellular, plasma membrane	54.32	53.75
CDY13237	Canola	extracellular, plasma membrane, vacuole	54.05	53.62
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	52.32	52.96
Bra034040.1-P	Field mustard	extracellular	9.56	52.94
GSMUA_Achr8P25690_001	Banana	plasma membrane	53.39	52.89
TraesCS2D01G332500.1	Wheat	golgi	52.06	52.69
TraesCS6A01G200600.1	Wheat	golgi	52.32	52.67
HORVU2Hr1G081920.3	Barley	plasma membrane	51.93	52.55
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	51.93	52.55
TraesCS6B01G226700.2	Wheat	golgi	52.06	52.48
CDY12605	Canola	extracellular, vacuole	49.8	52.37
Bra034037.1-P	Field mustard	extracellular, vacuole	49.8	52.37
CDY36746	Canola	plasma membrane	53.25	52.35
Bra028979.1-P	Field mustard	plasma membrane	53.25	52.35
EES10974	Sorghum	golgi	52.06	52.34
TraesCS6D01G189300.1	Wheat	unclear	51.79	52.21
AT1G66970.2	Thale cress	plasma membrane	54.32	52.1
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	51.79	51.93
KRG98622	Soybean	extracellular, golgi, plasma membrane	51.53	51.8
CDX86807	Canola	cytosol	15.67	51.3
EES05342	Sorghum	plasma membrane	51.13	51.13
Zm00001d050917_P002	Maize	plasma membrane	50.6	50.6
CDY11996	Canola	plasma membrane	51.93	50.58
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	51.26	50.46
CDY72472	Canola	mitochondrion	25.1	50.27
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	52.19	50.0
CDY29432	Canola	cytosol, peroxisome	38.91	49.16
Zm00001d017036_P002	Maize	plasma membrane	50.33	49.09
CDY12599	Canola	cytosol	26.43	48.77
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	17.66	48.72
AT3G20520.1	Thale cress	plasma membrane	47.01	48.56
CDY58867	Canola	plasma membrane	46.08	48.06
CDY19634	Canola	plasma membrane	46.08	47.8
TraesCS7B01G147500.1	Wheat	unclear	48.21	47.02
TraesCS7A01G243900.3	Wheat	golgi	47.68	46.68
Zm00001d025670_P001	Maize	mitochondrion	9.3	45.75
CDY42328	Canola	cytosol	15.67	45.74
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	48.34	44.94
CDX86766	Canola	plasma membrane	37.72	44.87
KXG36695	Sorghum	plasma membrane	45.82	44.52
CDX82242	Canola	cytosol	26.03	44.24
GSMUA_AchrUn_...	Banana	extracellular	9.56	43.9
GSMUA_Achr3P03920_001	Banana	cytosol	45.95	43.8
Zm00001d022153_P006	Maize	extracellular, mitochondrion	45.15	43.76
Bra035774.1-P	Field mustard	plasma membrane	47.14	43.45
Zm00001d052875_P001	Maize	mitochondrion	43.82	42.53
CDY36036	Canola	plasma membrane	47.41	42.05
Zm00001d031412_P001	Maize	extracellular	41.3	41.74
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	1.99	41.67
Bra001790.1-P	Field mustard	plasma membrane	45.82	41.27
OQU80956	Sorghum	cytosol	46.48	39.55
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	50.46	39.42
Solyc02g014490.2.1	Tomato	unclear	36.26	37.81
Solyc02g014530.2.1	Tomato	unclear	38.11	36.1
CDX86765	Canola	extracellular, mitochondrion, vacuole	7.84	35.54
AT1G66980.2	Thale cress	plasma membrane	52.32	34.35
CDY14478	Canola	plasma membrane	52.06	29.83
CDY60415	Canola	plasma membrane	46.35	29.43
Solyc06g069470.2.1	Tomato	extracellular	10.76	20.72

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395
UniProt:K4CHJ1	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF1
SUPFAM:SSF51695	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g065120.2	EnsemblPlants:Solyc07g065120.2.1	UniParc:UPI000276CA3F	SEG:seg

Description

No Description!

Coordinates

chr7:+:67018968..67026140

Molecular Weight (calculated)

82148.6 Da

IEP (calculated)

5.054

GRAVY (calculated)

-0.021

Length

753 amino acids

Sequence
(BLAST)

001: MRKMRSVLCL LVLCCSVAFV AAQRSNNVTS KWKTLSGDAP KVIARGGFSG LLPDSSFNAY MLAQAISSAD WVAWCDVQLT KDGVGICFPD IKLNNASDID
101: TLYPNRNNNY SVNGIPQTGW FSIDFSIKDL APVSLKQGVY SRSPRFDGTP QQILTVQDVA TQVKPPGLWL NIQHDSFYSQ HNLSMRSFVV SLSRSVIANY
201: ISSPEVNFLR SIASRLNPRV TKRVFRFLNE DDIEPSTSQT YGSLVKNLTF VKTFAAGILV PKHYIWPTDS SLYLQPHTSV VSDAHKEGLE IYAADFVNDV
301: PFAYNYSYDP VAEYLSFIDN GEFSVDGVLS DFPMSPSASV DCFSHLGAND KPQVTLQIIA PQGASGDYPG CTDLAYTKAA SDGADIIGCP VQMTKDGIPF
401: CLSSINLIDT TTAAQSPFSD IATTAPELQI TDGILTINLN WSDIQTLKPV ISTRYSDFRL SRNPKARNVG KFMSLADFLT FSKTANVSGI MISIENAAYL
501: AKQGLGVTDA VLDALSTAGY NNQTARKVMI QSNDSSVLEE FKKSSYELVY LVDDNISDIK NSTILEIKTF AKSVVITKKS VFPSEDAFII GQTNIVQKLQ
601: SANLPVYVRL FNNEFISQAW DFFSDSSTEI NNYVLGAGVD GLVTEYPGTA ARYRRNRCLA YKNLPPYMSP VQPGSLLGLM TVQSMPPVEP PSPVLDVSDV
701: TEPPLPPVAK INPSNDDGST ARAPTTPPNG QSSVVASILM SSVAVLLAIF MVY

Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)

001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL

Arabidopsis Description

GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.