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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:
  • plastid 3
  • golgi 4
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, plastid
Any Predictor:plastid, secretory
BaCelLo:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034040.1-P Field mustard extracellular 17.8 65.44
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 81.8 54.03
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 78.2 52.62
KRH46280 Soybean cytosol 27.2 51.71
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 73.8 51.46
Bra035244.1-P Field mustard plasma membrane 77.4 51.06
AT4G26690.1 Thale cress extracellular, vacuole 75.4 49.67
Zm00001d025670_P001 Maize mitochondrion 14.8 48.37
Bra034037.1-P Field mustard extracellular, vacuole 68.8 48.04
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 66.8 44.06
GSMUA_AchrUn_... Banana extracellular 14.4 43.9
Bra035208.1-P Field mustard extracellular, golgi, plastid 23.8 43.59
Bra028979.1-P Field mustard plasma membrane 64.2 41.91
PGSC0003DMT400033423 Potato extracellular 10.6 40.46
KRH73850 Soybean endoplasmic reticulum 56.0 37.18
KRG98625 Soybean extracellular 53.2 36.84
KRH14296 Soybean endoplasmic reticulum 55.4 36.74
Solyc12g014570.1.1 Tomato nucleus 55.0 36.62
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 55.4 36.59
PGSC0003DMT400057418 Potato extracellular 54.6 36.26
PGSC0003DMT400033463 Potato extracellular, plasma membrane 54.6 36.26
Solyc07g065120.2.1 Tomato extracellular 54.4 36.12
KRH46279 Soybean extracellular 52.2 35.9
KRH46281 Soybean extracellular, golgi, plasma membrane 54.4 35.74
EES05342 Sorghum plasma membrane 51.6 34.26
KRH46282 Soybean extracellular, plasma membrane 52.0 34.17
TraesCS6B01G226700.2 Wheat golgi 51.0 34.14
Zm00001d050917_P002 Maize plasma membrane 51.4 34.13
EES10974 Sorghum golgi 51.0 34.05
TraesCS6D01G189300.1 Wheat unclear 50.8 34.0
TraesCS6A01G200600.1 Wheat golgi 50.6 33.82
GSMUA_Achr8P25690_001 Banana plasma membrane 51.4 33.82
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 49.6 33.33
TraesCS2D01G332500.1 Wheat golgi 49.6 33.33
KRG98622 Soybean extracellular, golgi, plasma membrane 49.8 33.24
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 49.4 33.2
HORVU2Hr1G081920.3 Barley plasma membrane 49.2 33.06
Zm00001d017036_P002 Maize plasma membrane 50.4 32.64
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 62.6 32.47
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 50.6 32.19
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 49.0 32.03
TraesCS7A01G243900.3 Wheat golgi 48.4 31.47
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.0 31.29
GSMUA_Achr3P03920_001 Banana cytosol 49.4 31.27
KXG36695 Sorghum plasma membrane 48.4 31.23
Bra035774.1-P Field mustard plasma membrane 50.8 31.09
Bra020384.1-P Field mustard extracellular, plasma membrane 47.0 31.08
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 46.6 30.86
TraesCS7B01G147500.1 Wheat unclear 47.6 30.83
Zm00001d022153_P006 Maize extracellular, mitochondrion 47.8 30.76
Zm00001d052875_P001 Maize mitochondrion 47.6 30.67
Bra020395.1-P Field mustard plasma membrane 45.6 30.52
Bra006785.1-P Field mustard extracellular, plasma membrane 46.2 29.81
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 48.0 29.63
Bra001790.1-P Field mustard plasma membrane 48.8 29.19
Zm00001d031412_P001 Maize extracellular 43.2 28.99
OQU80956 Sorghum cytosol 48.2 27.23
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.4 19.44
Bra009316.1-P Field mustard extracellular, vacuole 9.0 12.1
Bra003814.1-P Field mustard golgi 9.4 12.02
Bra015928.1-P Field mustard extracellular, golgi, vacuole 9.2 11.7
Bra003813.1-P Field mustard cytosol 9.0 10.92
PGSC0003DMT400033459 Potato endoplasmic reticulum 0.6 1.16
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra019073EnsemblPlants:Bra019073.1EnsemblPlants:Bra019073.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4DRD0PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI0002541267
Description
AT4G26690 (E=2e-221) SHV3, MRH5, GPDL2 | SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA03:-:26456896..26458925
Molecular Weight (calculated)
54875.8 Da
IEP (calculated)
6.422
GRAVY (calculated)
-0.057
Length
500 amino acids
Sequence
(BLAST)
001: MGASTVLLCG VVLIHVFASQ TDAQRPRSPW KTLSGDAPRV ISRGGFSGLF PDSSLDAYNF ALQTSVADAI LWCDVQLTKD GAGICFPDLN MSNASTIEVV
101: YPKGQKTYPV NGVPTQGWFT VDFSLKDLNK VYLIRGILSR SDRFDGNGYT ISTVQTVNIE LRPRGLWLNV QHDAFYAQNN LSMSNFLISA SKNVSIDYIS
201: SPEVNFFTKI AGRFGHNGPI FVFRFLEKET FEPTTNRSYG SILSNLTFVK TFASGILVPK SYVLPLDDKQ YLLPSTSLVQ DAHKAGLEVF VSGFANDVDI
301: AHDYSYDPVS EYLSFVDNGN FSVDGVLSDF PISASASVEC FSHLRRNATK QVDFLVISKN GASGDYPGCT DLAYDKAIRD GAGVIDCSVQ MSRDGKPFCS
401: HSIDLSNITN IAQTSFAQRS THVPEISSND GIYTFSLTWS EIQSLIPAIS NPYRVYNMFR NPNEKKSGKL ILLSEFLKLA KHSTSLSGVL ISVEVSSRTS
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.