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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 nucleus: 21132161
extracellular: 22945350
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 22945350 doi
C Liao, F Hochholdinger, C Li
Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH73850 Soybean endoplasmic reticulum 94.16 94.29
KRH46281 Soybean extracellular, golgi, plasma membrane 69.23 68.59
KRH46282 Soybean extracellular, plasma membrane 67.9 67.28
KRG98622 Soybean extracellular, golgi, plasma membrane 65.92 66.36
KRH46280 Soybean cytosol 22.68 65.02
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 61.41 61.16
KRG98625 Soybean extracellular 57.69 60.25
PGSC0003DMT400033423 Potato extracellular 10.34 59.54
KRH46279 Soybean extracellular 57.03 59.15
Solyc12g014570.1.1 Tomato nucleus 58.22 58.46
PGSC0003DMT400033463 Potato extracellular, plasma membrane 57.96 58.03
PGSC0003DMT400057418 Potato extracellular 57.29 57.37
Solyc07g065120.2.1 Tomato extracellular 57.16 57.24
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 56.37 56.07
CDY17323 Canola plasma membrane 56.5 55.47
AT4G26690.1 Thale cress extracellular, vacuole 55.84 55.47
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 36.74 55.4
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 52.25 54.95
CDY46687 Canola extracellular, plasma membrane, vacuole 52.12 54.81
AT1G66970.2 Thale cress plasma membrane 56.9 54.65
CDY45656 Canola extracellular, golgi, plasma membrane 47.21 54.52
CDX92806 Canola extracellular, plasma membrane, vacuole 51.59 54.33
AT5G55480.1 Thale cress plasma membrane 55.17 54.31
CDY72472 Canola mitochondrion 27.06 54.26
CDX94294 Canola extracellular, plasma membrane, vacuole 54.38 54.16
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 54.38 54.16
CDY61647 Canola extracellular, plasma membrane 54.11 54.04
CDX89312 Canola extracellular, plasma membrane, vacuole 54.24 54.03
Bra035244.1-P Field mustard plasma membrane 53.58 53.3
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 52.52 53.3
GSMUA_Achr8P25690_001 Banana plasma membrane 53.71 53.29
CDY13237 Canola extracellular, plasma membrane, vacuole 53.58 53.23
Bra028979.1-P Field mustard plasma membrane 53.98 53.13
CDY36746 Canola plasma membrane 53.98 53.13
Zm00001d050917_P002 Maize plasma membrane 53.05 53.12
EES10974 Sorghum golgi 52.65 53.0
CDY12605 Canola extracellular, vacuole 50.13 52.79
Bra034037.1-P Field mustard extracellular, vacuole 50.0 52.65
TraesCS6B01G226700.2 Wheat golgi 51.99 52.48
TraesCS6D01G189300.1 Wheat unclear 51.99 52.48
TraesCS6A01G200600.1 Wheat golgi 51.86 52.27
CDY29432 Canola cytosol, peroxisome 41.25 52.18
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 52.92 52.16
TraesCS2D01G332500.1 Wheat golgi 51.46 52.15
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 51.33 52.02
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 51.33 52.02
EES05342 Sorghum plasma membrane 51.86 51.93
HORVU2Hr1G081920.3 Barley plasma membrane 51.06 51.75
CDY12599 Canola cytosol 27.59 50.98
CDY19634 Canola plasma membrane 48.67 50.55
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 52.65 50.51
CDY11996 Canola plasma membrane 51.72 50.45
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 50.0 50.2
Zm00001d017036_P002 Maize plasma membrane 51.19 50.0
CDY42328 Canola cytosol 16.98 49.61
AT3G20520.1 Thale cress plasma membrane 47.88 49.52
TraesCS7A01G243900.3 Wheat golgi 50.27 49.28
CDY60410 Canola extracellular 8.89 49.26
CDY58867 Canola plasma membrane 47.08 49.17
CDX86807 Canola cytosol 14.99 49.13
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.84 49.03
TraesCS7B01G147500.1 Wheat unclear 49.2 48.06
Bra035208.1-P Field mustard extracellular, golgi, plastid 17.11 47.25
CDX82242 Canola cytosol 27.72 47.18
Bra034040.1-P Field mustard extracellular 8.36 46.32
Bra035774.1-P Field mustard plasma membrane 50.0 46.14
KXG36695 Sorghum plasma membrane 47.35 46.06
Zm00001d025670_P001 Maize mitochondrion 9.28 45.75
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 48.94 45.56
CDX86766 Canola plasma membrane 38.06 45.34
Zm00001d052875_P001 Maize mitochondrion 46.02 44.72
GSMUA_Achr3P03920_001 Banana cytosol 46.82 44.68
Zm00001d022153_P006 Maize extracellular, mitochondrion 46.02 44.66
GSMUA_AchrUn_... Banana extracellular 9.42 43.29
Zm00001d031412_P001 Maize extracellular 42.44 42.95
CDY36036 Canola plasma membrane 47.61 42.28
Bra001790.1-P Field mustard plasma membrane 46.68 42.11
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.99 41.67
KRH20083 Soybean plasma membrane 41.78 41.23
KRH03081 Soybean extracellular, plasma membrane 41.78 41.23
OQU80956 Sorghum cytosol 47.08 40.11
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 50.93 39.83
AT1G66980.2 Thale cress plasma membrane 53.18 34.96
CDX86765 Canola extracellular, mitochondrion, vacuole 7.56 34.34
CDY14478 Canola plasma membrane 52.12 29.91
CDY60415 Canola plasma membrane 46.29 29.43
KRH03139 Soybean extracellular, golgi 11.8 22.94
KRH56805 Soybean nucleus 11.8 22.7
Protein Annotations
EntrezGene:100792750Gene3D:3.20.20.190MapMan:35.1EMBL:ACUP02008496EnsemblPlantsGene:GLYMA_14G017100GO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domUniProt:I1M6K6InterPro:IPR017946InterPro:IPR030395EnsemblPlants:KRH14296ProteinID:KRH14296
ProteinID:KRH14296.1PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1
SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI000233AB4FSEG:seg::
Description
hypothetical protein
Coordinates
chr14:-:1229583..1236592
Molecular Weight (calculated)
81749.4 Da
IEP (calculated)
5.793
GRAVY (calculated)
0.066
Length
754 amino acids
Sequence
(BLAST)
001: MSNSRALSAP LALLLLHSLL FLVSAQRSTW NTLGGGAPLV VARGGFSGIL PDSSGAAYNL AVISTGPDVY IWCDVQLTKD GVGICQPDIN LANSTYIATI
101: YPNKTTSYSV NGVPTSGYFP LDYTLKDLSS VILTQGVYSR STLFDGNGFG ILTVDDLVKL DQKPKGIWLN IQHDAFYAQH NLSMRSFVLS VSRSVVFSYI
201: SSPEVGFLRS IASRFNPKTT KLVFRFMRQS DVDPSTNQTY GSLLKNLTFI KTFASGILVP KGYIWPVDAT LYLQSHTSLV SDAHKAGLEV FASDFVNDVP
301: SSFNYSYDPL AEYLQFVDNG DFSVDGVLSD FPITPFEAIG CFAHLGTNAT KKDKTLVISK YGASGDYPAC TDLAYNKAIS DGVDVLDCPV QMSKDGTPFC
401: LNSIDLIEST TVAQSSFSKF AMTIPEIKSG SGIFAFNLTW NDIKILTPSI LNPFAKYRLF RNPRSKNAGT LLALSDFLSL TKNQTSLSGV AIIVENAAYL
501: ADKQGLSVID AVIGALSKAG YDKPGSQKVY IQSTNSSVLL KFKEKTSYEL VYKIDETVGD AANAAVEDIK SFASSVVVNK DSVIPNNNKF LTAYTNIVPK
601: LKNANLSVFV ETFSNEFVSQ AWDFFSDPTV EINSYIEGAQ IDGIITDFPK TADRYRRNKC LGLGDNKPTY MEPVQPGGLF GLITKEFLPP AEAPLPPLTE
701: SEVAESPLPP VAKIAPASSP NARTKFPQGN SQPKVTVCFF LSTLAVFIAS LLLL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.