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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86766 Canola plasma membrane 76.73 87.52
CDX86765 Canola extracellular, mitochondrion, vacuole 17.04 74.1
CDY36746 Canola plasma membrane 71.75 67.62
CDY17323 Canola plasma membrane 70.64 66.41
CDY11996 Canola plasma membrane 70.08 65.46
AT5G55480.1 Thale cress plasma membrane 69.25 65.27
CDY45656 Canola extracellular, golgi, plasma membrane 58.73 64.93
CDY71959 Canola extracellular, plastid, vacuole 28.95 63.72
CDY42328 Canola cytosol 20.91 58.53
CDX86807 Canola cytosol 18.14 56.96
CDX94294 Canola extracellular, plasma membrane, vacuole 59.28 56.54
CDX89312 Canola extracellular, plasma membrane, vacuole 59.0 56.27
CDY46687 Canola extracellular, plasma membrane, vacuole 54.85 55.23
CDY12599 Canola cytosol 31.02 54.9
CDX92806 Canola extracellular, plasma membrane, vacuole 54.43 54.89
CDY12605 Canola extracellular, vacuole 53.6 54.05
CDY61647 Canola extracellular, plasma membrane 56.51 54.04
CDY72472 Canola mitochondrion 27.84 53.46
PGSC0003DMT400033423 Potato extracellular 9.7 53.44
CDY13237 Canola extracellular, plasma membrane, vacuole 55.54 52.83
KRH46281 Soybean extracellular, golgi, plasma membrane 49.86 47.31
Solyc12g014570.1.1 Tomato nucleus 49.03 47.14
KRH14296 Soybean endoplasmic reticulum 49.17 47.08
CDY60410 Canola extracellular 8.86 47.06
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 49.17 46.9
KRH73850 Soybean endoplasmic reticulum 48.89 46.88
CDY12601 Canola extracellular 8.73 46.32
PGSC0003DMT400033463 Potato extracellular, plasma membrane 48.2 46.22
Solyc07g065120.2.1 Tomato extracellular 48.06 46.08
PGSC0003DMT400057418 Potato extracellular 47.92 45.95
KRH46282 Soybean extracellular, plasma membrane 48.34 45.86
GSMUA_Achr8P25690_001 Banana plasma membrane 47.23 44.87
KRG98622 Soybean extracellular, golgi, plasma membrane 45.84 44.19
KRG98625 Soybean extracellular 43.63 43.63
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 47.37 43.51
KRH46280 Soybean cytosol 15.79 43.35
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 45.01 43.28
TraesCS6A01G200600.1 Wheat golgi 44.74 43.18
TraesCS2D01G332500.1 Wheat golgi 44.46 43.15
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 44.46 43.15
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 44.46 43.15
EES10974 Sorghum golgi 44.74 43.12
CDX82242 Canola cytosol 26.45 43.12
HORVU2Hr1G081920.3 Barley plasma membrane 44.32 43.01
KRH46279 Soybean extracellular 43.21 42.92
TraesCS6D01G189300.1 Wheat unclear 44.32 42.84
CDY29432 Canola cytosol, peroxisome 35.32 42.79
Zm00001d050917_P002 Maize plasma membrane 44.6 42.76
TraesCS6B01G226700.2 Wheat golgi 44.18 42.7
EES05342 Sorghum plasma membrane 44.32 42.5
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 45.01 42.48
PGSC0003DMT400033459 Potato endoplasmic reticulum 15.24 42.47
TraesCS7A01G243900.3 Wheat golgi 44.46 41.74
CDY19634 Canola plasma membrane 41.83 41.6
Zm00001d017036_P002 Maize plasma membrane 43.91 41.06
TraesCS7B01G147500.1 Wheat unclear 43.21 40.41
KXG36695 Sorghum plasma membrane 42.38 39.48
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 43.91 39.14
Zm00001d052875_P001 Maize mitochondrion 41.97 39.05
Zm00001d022153_P006 Maize extracellular, mitochondrion 41.83 38.87
GSMUA_Achr3P03920_001 Banana cytosol 41.83 38.23
CDY43885 Canola extracellular, golgi, plasma membrane 39.34 37.82
CDY02788 Canola plasma membrane 38.92 37.72
Zm00001d031412_P001 Maize extracellular 38.92 37.72
CDY32730 Canola plasma membrane 38.92 37.72
CDY32720 Canola extracellular, plastid, vacuole 39.2 37.63
CDY36036 Canola plasma membrane 44.04 37.46
CDY02800 Canola extracellular, plasma membrane, plastid 38.78 37.43
CDX88656 Canola plasma membrane 39.89 37.16
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.8 36.11
CDY11832 Canola cytosol, peroxisome, plastid 7.62 35.95
CDY11831 Canola extracellular, vacuole 27.98 35.69
OQU80956 Sorghum cytosol 43.35 35.37
Zm00001d025670_P001 Maize mitochondrion 7.2 33.99
GSMUA_AchrUn_... Banana extracellular 7.62 33.54
CDY14478 Canola plasma membrane 55.68 30.59
CDY60415 Canola plasma membrane 50.14 30.52
CDX71386 Canola extracellular 6.09 23.28
CDX85814 Canola extracellular 6.09 22.45
CDX73068 Canola extracellular 12.19 22.28
CDY11071 Canola extracellular, golgi 12.05 22.25
CDX68196 Canola golgi 12.19 22.17
CDX69980 Canola extracellular, golgi, vacuole 11.36 22.04
CDX99041 Canola extracellular 11.36 21.98
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 12.33 21.19
CDX68195 Canola peroxisome 11.5 20.15
CDX85815 Canola mitochondrion 6.51 16.26
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078J4J5UniProt:A0A078J4J5EnsemblPlants:CDY58867ProteinID:CDY58867
ProteinID:CDY58867.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00025271001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
TMHMM:TMhelixUniParc:UPI0004EE7335SEG:seg:::
Description
BnaC09g52640DBnaC09g52640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4J5]
Coordinates
chrLK033707:+:27904..30822
Molecular Weight (calculated)
80248.3 Da
IEP (calculated)
6.909
GRAVY (calculated)
0.017
Length
722 amino acids
Sequence
(BLAST)
001: MITYMQDNPS MFRLRASKFL LLYVLILSQF LSTQLLAQRS KSPWQTLTGE APLIIARGGF SGMFPDSSVT AYSFVSATSV PDAVLWCDVQ LTKDGVGISF
101: PDVTMYKDSN VKMLTLNGKT LTFLTESLLR TGSPLTSPPK ISKACSHDAF YAQHNLSMSR FLLSVSKTVI IDYLSSPELK FFRDIGSRFG KTGPKFVFRF
201: LEKDEVEVST NQTYGSLMTN LTFINMFASG VLVPKSYIWP VDEDQYLLPH TTFVQDAHKE GLQVYASGFA NDFDLAYNYS YDPLAEYLSF MDNGNFSVDG
301: VVSDFPLTAS SAVVLLLQRK GIFFVISKNG ASGDYPGCSD LAYSKAIEDG ADIIDYAIQM SSDGIPFCLN SSNLLEGTNV FQSPFINRSS TVPEIAPHAG
401: LYSFSLRWTE IKTLRLAMTH PYSLGFNLFR NPREKSSEKI VSLYDFLILA NKSSSLVGVL ISVENVAYLR EKQGIDVVKE VLYAFKEAYY INATKRVMIQ
501: SSNNPVLVDF KKQSPYEIVY QVEKNVGDIV DSAIEEIKKF ADAVVVSRLS VYSTRNFFLT GQTHLVEKLH KFNLPVYVKT FRNEFVSQPW DFFSDATVEI
601: NTYVAGAGVS GTITEFPLTA ARYKRNRCLT RKDHPPYMPL VKPAGLLGFV NHDSPHPAFT ADDVTEPPLP PVTFRTPPNI PGPLSTDEKA PNSKTRLTPP
701: LLLPALAMAL ASLLLLSSLS IL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.