Factsheet for TraesCS7D01G242500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, unclear
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G147500.1	Wheat	unclear	90.86	95.34
TraesCS7A01G243900.3	Wheat	golgi	82.22	86.61
KXG36695	Sorghum	plasma membrane	63.46	66.32
Zm00001d022153_P006	Maize	extracellular, mitochondrion	62.22	64.86
Os09t0339800-00	Rice	extracellular, golgi	42.96	61.81
Zm00001d052875_P001	Maize	mitochondrion	59.14	61.73
Zm00001d031412_P001	Maize	extracellular	55.19	60.0
OQU80956	Sorghum	cytosol	65.06	59.55
Os12t0456700-01	Rice	cytosol	33.09	58.77
TraesCS2D01G332500.1	Wheat	golgi	52.47	57.12
PGSC0003DMT400033423	Potato	extracellular	9.01	55.73
TraesCS6D01G189300.1	Wheat	unclear	50.37	54.62
KRH46280	Soybean	cytosol	16.67	51.33
KRH14296	Soybean	endoplasmic reticulum	45.56	48.94
KRH73850	Soybean	endoplasmic reticulum	45.43	48.87
PGSC0003DMT400057418	Potato	extracellular	45.19	48.61
Solyc12g014570.1.1	Tomato	nucleus	45.06	48.6
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	45.06	48.47
Solyc07g065120.2.1	Tomato	extracellular	44.94	48.34
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	45.06	48.22
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	29.63	48.0
CDY71959	Canola	extracellular, plastid, vacuole	19.38	47.87
KRH46281	Soybean	extracellular, golgi, plasma membrane	43.83	46.65
AT5G55480.1	Thale cress	plasma membrane	44.07	46.61
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.47	46.3
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.96	45.91
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.62	45.89
Bra028979.1-P	Field mustard	plasma membrane	43.33	45.82
CDY46687	Canola	extracellular, plasma membrane, vacuole	40.49	45.75
CDY17323	Canola	plasma membrane	43.33	45.7
CDY61647	Canola	extracellular, plasma membrane	42.59	45.7
Bra035244.1-P	Field mustard	plasma membrane	42.72	45.65
AT4G26690.1	Thale cress	extracellular, vacuole	42.72	45.59
CDY36746	Canola	plasma membrane	43.09	45.56
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.47	45.44
CDX89312	Canola	extracellular, plasma membrane, vacuole	42.47	45.44
CDX94294	Canola	extracellular, plasma membrane, vacuole	42.47	45.44
KRG98622	Soybean	extracellular, golgi, plasma membrane	41.98	45.39
KRH46282	Soybean	extracellular, plasma membrane	42.35	45.07
CDX92806	Canola	extracellular, plasma membrane, vacuole	39.75	44.97
CDY72472	Canola	mitochondrion	20.86	44.95
CDY45656	Canola	extracellular, golgi, plasma membrane	36.05	44.72
CDY13237	Canola	extracellular, plasma membrane, vacuole	41.73	44.53
AT1G66970.2	Thale cress	plasma membrane	43.09	44.46
KRG98625	Soybean	extracellular	39.26	44.04
CDY12605	Canola	extracellular, vacuole	38.89	43.99
CDY58867	Canola	plasma membrane	39.14	43.91
Bra034037.1-P	Field mustard	extracellular, vacuole	38.77	43.85
CDY11996	Canola	plasma membrane	41.48	43.47
KRH46279	Soybean	extracellular	39.01	43.47
CDY29432	Canola	cytosol, peroxisome	31.48	42.79
CDY60410	Canola	extracellular	7.16	42.65
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	14.2	42.12
CDY19634	Canola	plasma membrane	37.65	42.01
Bra034040.1-P	Field mustard	extracellular	7.04	41.91
AT3G20520.1	Thale cress	plasma membrane	37.28	41.43
CDX86807	Canola	cytosol	11.73	41.3
CDY12599	Canola	cytosol	20.49	40.69
CDX86766	Canola	plasma membrane	31.73	40.6
PGSC0003DMT400033459	Potato	endoplasmic reticulum	12.84	40.15
GSMUA_AchrUn_...	Banana	extracellular	8.02	39.63
CDX82242	Canola	cytosol	21.23	38.83
CDY42328	Canola	cytosol	12.35	38.76
TraesCS6D01G163200.1	Wheat	extracellular, plasma membrane	35.56	38.45
Bra035774.1-P	Field mustard	plasma membrane	38.64	38.31
TraesCS1D01G357000.1	Wheat	extracellular, plasma membrane	35.56	37.84
CDY36036	Canola	plasma membrane	39.26	37.46
Bra001790.1-P	Field mustard	plasma membrane	38.15	36.96
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	41.11	34.54
CDX86765	Canola	extracellular, mitochondrion, vacuole	6.79	33.13
AT1G66980.2	Thale cress	plasma membrane	41.98	29.64
CDY14478	Canola	plasma membrane	42.1	25.95
CDY60415	Canola	plasma membrane	36.67	25.04
TraesCS2D01G183800.1	Wheat	extracellular	9.75	21.47
TraesCS3D01G299100.1	Wheat	extracellular, golgi	10.0	20.72
TraesCS1D01G114600.1	Wheat	extracellular, vacuole	9.38	19.9
TraesCS1D01G114700.2	Wheat	extracellular	9.01	19.11

Protein Annotations

EnsemblPlants:TraesCS7D01G242500.1	EnsemblPlantsGene:TraesCS7D01G242500	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF6	PFAM:PF03009	PFscan:PS51704
SEG:seg	SUPFAM:SSF51695	TIGR:cd08603	TIGR:cd08604	MapMan:35.1	:

Description

No Description!

Coordinates

chr7D:+:207545957..207550795

Molecular Weight (calculated)

87433.0 Da

IEP (calculated)

7.081

GRAVY (calculated)

-0.060

Length

810 amino acids

Sequence
(BLAST)

001: MRSATAPEHF QCSAPPSSLS LFSSPPARVR VLRGNLPGMR SGRVPGRGGG GGGGGETAAL LCGLLLLLGA ADAQGIRRPS SYKTLRGDAP LVIAKGGFSG
101: VFPDSSYGAF SFALVASAPD TSLWCDVQLT KDGVGICLRD INMSNCTNAA QVYPAKNKKE AKYVIDGVPK TGYFSLDFTL SEIQTTLSLT QGIYSRTERF
201: DTMYSILSVT DFQSSVTPPS VWLNVQRDIF YKQHGLNMRS YIVSILKSVP VKYISSPELG FLKSISKRAG GITKLVFRFP DNFLSDPSTN QTYSSLSKNL
301: TFIKTIASGI MVPKIYIWPV TNDNYLQPPT SFVQDAHSAG LEIYASDFAN DRIIPYNYSY DPLQEYLSFI SDGGFSVDGV LTDYPITASE AIGCFADLNA
401: SKADHGKPLI ISHNGASGDY PDCTDLAYQN AIKDGADVID CALQVTKDEV LICMSSINLL DTTNVQMTPF SSRTSVVPEI RGTPGIFTFN LTWNDISDSS
501: LKPKISSPLS TYYLVRNPRY TNTGKFVKFS DFLEYGKNQD LSGIMITIEN AAFMAKSLGF DVLESLTTAL NDAGYNNQTT KEVMIQSTDS AVLVKLKQQK
601: AKYKLVYTLQ PGIGDASASS LADVKEFAEA VVVDRSSFFA QSVHFIINQT SLLTDLQSAG LTVYAQVFRN EFVSQPWDFF GDETVEINNY AQSLNVDGLI
701: TDFPKTVRRY KRNSCTGLGN DVPSYMGNVT VGGLAQLLKN RAAPQAQPPS VAPMPKLDAP SVQRPPFPTV APKNAPSGAA PPPGSSPSAA HTTAVSTCIL
801: LVLACATLLL

Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)

001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL

Arabidopsis Description

SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.