Factsheet for TraesCS1D01G114600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G113200.1	Wheat	extracellular	97.38	97.38
TraesCS1B01G133300.1	Wheat	extracellular	96.86	96.86
HORVU2Hr1G087820.3	Barley	cytosol	75.92	93.85
HORVU6Hr1G074900.1	Barley	cytosol	40.58	93.37
HORVU6Hr1G024750.1	Barley	extracellular, vacuole	19.63	91.46
TraesCS1D01G114700.2	Wheat	extracellular	91.36	91.36
Os03t0603600-01	Rice	extracellular	79.32	77.49
OQU91395	Sorghum	extracellular, plasma membrane	78.8	76.79
Zm00001d033187_P001	Maize	plastid	74.08	68.03
TraesCS3D01G299100.1	Wheat	extracellular, golgi	65.71	64.19
TraesCS2D01G183800.1	Wheat	extracellular	60.99	63.32
TraesCS2D01G332500.1	Wheat	golgi	21.99	11.29
TraesCS6D01G163200.1	Wheat	extracellular, plasma membrane	21.99	11.21
TraesCS6D01G189300.1	Wheat	unclear	21.47	10.98
TraesCS1D01G357000.1	Wheat	extracellular, plasma membrane	21.47	10.78
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	19.9	9.38

Protein Annotations

EnsemblPlants:TraesCS1D01G114600.1	EnsemblPlantsGene:TraesCS1D01G114600	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	PFAM:PF03009	PFscan:PS51704
SignalP:SignalP-noTM	SUPFAM:SSF51695	TIGR:cd08602	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:+:110603282..110605960

Molecular Weight (calculated)

44193.8 Da

IEP (calculated)

9.376

GRAVY (calculated)

-0.381

Length

382 amino acids

Sequence
(BLAST)

001: MVSLWHTSFI VLVLLFLGGS HANPAARRHG QLDVNHKKQP LQTSRPYNIA HRGSNGEIPE ETAAAYLRAI EEGADFIETD ILASKDGHLI CFHDVILDAT
101: TDIANRTEFA GRKRTYDVQG FKLTGWFIVD FTLRELKSLR VKQRYNFRDQ QYNWKYNILT FDEFILIALH ADRVVGIYPE IKNPIFINQH VKWSGGKKFE
201: DKFVGTLLKY GYKGKYMSKD WLKKPLFIQS FAPTSLIYIS NMTNAPKLLL IYDTTVPTQD TNQSYYEITS NGYLAFIRKY VIGIGPWKDT IIPPKNNHLG
301: LATDLVARAH ALNLQVHPYT FRNENSFLHF NFHQDPYAEY EYWLKEIGVD ALFTDFTGSL HKYQEWTAPH QKKEKKCRGT PA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.