Factsheet for Os03t0603600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G087820.3	Barley	cytosol	63.17	79.94
OQU91395	Sorghum	extracellular, plasma membrane	79.54	79.34
TraesCS1D01G114600.1	Wheat	extracellular, vacuole	77.49	79.32
TraesCS1B01G133300.1	Wheat	extracellular	77.24	79.06
TraesCS1A01G113200.1	Wheat	extracellular	76.98	78.8
TraesCS1D01G114700.2	Wheat	extracellular	76.21	78.01
TraesCS1A01G113300.1	Wheat	extracellular	75.7	77.49
TraesCS1B01G133400.2	Wheat	extracellular	75.96	76.94
HORVU6Hr1G024750.1	Barley	extracellular, vacuole	15.6	74.39
HORVU6Hr1G074900.1	Barley	cytosol	31.46	74.1
Zm00001d033187_P001	Maize	plastid	75.7	71.15
Os01t0763600-01	Rice	extracellular	68.8	68.8
HORVU1Hr1G024870.4	Barley	cytosol	76.47	67.95
Os07t0602800-00	Rice	mitochondrion	57.03	59.79
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	2.3	25.0
Os12t0456700-01	Rice	cytosol	18.93	16.23
Os02t0187400-01	Rice	plasma membrane	22.76	12.66
Os04t0472300-01	Rice	extracellular, plasma membrane	23.27	12.3
Os02t0588500-02	Rice	extracellular	21.74	11.35
Os08t0503200-01	Rice	plasma membrane	22.25	11.18
Os09t0339800-00	Rice	extracellular, golgi	15.86	11.01
Os01t0763700-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EntrezGene:4333407	ProteinID:AAT78755.1	ProteinID:ABF97510.1	EMBL:AK071836
ProteinID:BAF12542.1	ProteinID:BAS85211.1	ProteinID:EAZ27725.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	EnsemblPlantsGene:Os03g0603600	EnsemblPlants:Os03t0603600-01	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704
PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	UniProt:Q6AUZ6	SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI00003FE667
RefSeq:XP_015627990.1	SEG:seg	:	:	:	:

Description

PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os03t0603600-01)

Coordinates

chr3:+:22616005..22619553

Molecular Weight (calculated)

45451.8 Da

IEP (calculated)

5.157

GRAVY (calculated)

-0.377

Length

391 amino acids

Sequence
(BLAST)

001: MAAFWLISII VLVLLSGESN ANPAASQQSQ LDVNHRKPLQ TFRPYNIAHR GSNGEIPEET TAAYLRAIEE GADFIESDIL ATKDGHLICF HDVILDATTD
101: IANRTEFANR KRTYEVERQN VTGWFVVDFT LEELKSLRVK QRYNFRDQQY NGKYQIITFD EYILIALYAD RVVGIYPELK NPIFINEHVK WSDGKKFEDK
201: FVQTLLKYGY KGEYMSEDWL KQPLFIQSFA PSSLIYMSNM TNSPKIFLID DTTVRTQDTN QSYYEITSDA YLAFIRKYIV GIGPWKDTIV PPINNYLGPP
301: TDLVARAHAL NLQVHPYTFR NENMFLHFDF HQDPYLEYEY WLGEIGVDGL FTDFTGTLHR FQECTTPYPK NEKNAEALLQ KINYMLKDSG Y

Best Arabidopsis Sequence Match ( AT5G08030.1 )
(BLAST)

001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.