Factsheet for HORVU6Hr1G074900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G024750.1	Barley	extracellular, vacuole	45.18	91.46
HORVU2Hr1G087820.3	Barley	cytosol	90.36	48.54
TraesCS1A01G113200.1	Wheat	extracellular	93.37	40.58
TraesCS1D01G114600.1	Wheat	extracellular, vacuole	93.37	40.58
TraesCS1B01G133300.1	Wheat	extracellular	91.57	39.79
HORVU1Hr1G024870.4	Barley	cytosol	91.57	34.55
OQU91395	Sorghum	extracellular, plasma membrane	76.51	32.4
Os03t0603600-01	Rice	extracellular	74.1	31.46
HORVU2Hr1G032670.2	Barley	cytosol	57.83	28.24
Zm00001d033187_P001	Maize	plastid	69.88	27.88
HORVU3Hr1G073870.1	Barley	extracellular, golgi	60.84	25.83
HORVU2Hr1G081920.3	Barley	plasma membrane	21.69	4.84
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	22.29	4.84
HORVU1Hr1G080970.22	Barley	extracellular, plasma membrane	21.69	4.43

Protein Annotations

EnsemblPlants:HORVU6Hr1G074900.1	EnsemblPlantsGene:HORVU6Hr1G074900	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	PFAM:PF03009	SUPFAM:SSF51695
UniParc:UPI000B46631A	UniProt:A0A287UPS1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:516300991..516303248

Molecular Weight (calculated)

19410.0 Da

IEP (calculated)

9.091

GRAVY (calculated)

-0.487

Length

166 amino acids

Sequence
(BLAST)

001: MSKDWLKKPL FIQSFAPTSL IYISNMTNAP KLLLIYPTTV PTEDTNHSYY EITSNGYLAF IRKYVIGIGP WKDRIIPPNN NHLGPATDLV ARAHALNLQV
101: HPYTFRNENS FLHFNFHQDP YAEYEYWVRE IGVDALFTDF TGSLHKYQEW TAPHQRKEKK YRGTLA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.