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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
TargetP:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G200600.1 Wheat golgi 89.67 91.71
TraesCS6B01G226700.2 Wheat golgi 89.15 91.3
TraesCS6D01G189300.1 Wheat unclear 88.89 91.03
Os02t0588500-02 Rice extracellular 72.42 73.97
Zm00001d050917_P002 Maize plasma membrane 72.29 73.44
EES05342 Sorghum plasma membrane 71.11 72.24
Zm00001d017036_P002 Maize plasma membrane 71.11 70.47
HORVU2Hr1G081920.3 Barley plasma membrane 66.93 68.82
GSMUA_Achr8P25690_001 Banana plasma membrane 58.3 58.68
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 57.52 55.98
KRH14296 Soybean endoplasmic reticulum 52.16 52.92
KRH46280 Soybean cytosol 18.17 52.85
KRH73850 Soybean endoplasmic reticulum 51.9 52.72
GSMUA_Achr3P03920_001 Banana cytosol 53.2 51.52
Solyc07g065120.2.1 Tomato extracellular 50.46 51.26
PGSC0003DMT400033423 Potato extracellular 8.76 51.15
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 50.59 51.12
PGSC0003DMT400057418 Potato extracellular 49.93 50.73
CDY71959 Canola extracellular, plastid, vacuole 21.7 50.61
KRH46281 Soybean extracellular, golgi, plasma membrane 49.67 49.93
KRH46282 Soybean extracellular, plasma membrane 49.67 49.93
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 49.41 49.87
Solyc12g014570.1.1 Tomato nucleus 48.89 49.8
PGSC0003DMT400033463 Potato extracellular, plasma membrane 48.63 49.4
KRH46279 Soybean extracellular 46.8 49.24
CDY17323 Canola plasma membrane 49.41 49.22
AT5G55480.1 Thale cress plasma membrane 49.28 49.22
CDY36746 Canola plasma membrane 49.15 49.09
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 32.03 49.0
Bra028979.1-P Field mustard plasma membrane 49.02 48.96
KRG98625 Soybean extracellular 46.14 48.89
AT4G26690.1 Thale cress extracellular, vacuole 48.5 48.88
CDX94294 Canola extracellular, plasma membrane, vacuole 48.1 48.61
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 48.1 48.61
KRG98622 Soybean extracellular, golgi, plasma membrane 47.58 48.6
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 47.19 48.59
CDX89312 Canola extracellular, plasma membrane, vacuole 47.97 48.48
CDY61647 Canola extracellular, plasma membrane 47.32 47.95
CDY45656 Canola extracellular, golgi, plasma membrane 40.91 47.93
Bra035244.1-P Field mustard plasma membrane 47.19 47.63
CDY46687 Canola extracellular, plasma membrane, vacuole 44.58 47.56
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 44.58 47.56
CDY11996 Canola plasma membrane 47.58 47.09
CDX92806 Canola extracellular, plasma membrane, vacuole 44.05 47.07
CDY12605 Canola extracellular, vacuole 44.05 47.07
CDY13237 Canola extracellular, plasma membrane, vacuole 46.67 47.04
Bra034037.1-P Field mustard extracellular, vacuole 43.79 46.79
AT1G66970.2 Thale cress plasma membrane 47.58 46.37
CDX86807 Canola cytosol 13.73 45.65
CDY29432 Canola cytosol, peroxisome 35.42 45.47
Bra035208.1-P Field mustard extracellular, golgi, plastid 16.21 45.42
CDY72472 Canola mitochondrion 22.22 45.21
CDY58867 Canola plasma membrane 42.48 45.01
CDY12599 Canola cytosol 23.92 44.85
CDY19634 Canola plasma membrane 42.22 44.49
AT3G20520.1 Thale cress plasma membrane 42.35 44.44
CDY42328 Canola cytosol 14.9 44.19
CDY60410 Canola extracellular 7.71 43.38
CDX82242 Canola cytosol 24.84 42.89
Bra034040.1-P Field mustard extracellular 7.45 41.91
CDX86766 Canola plasma membrane 34.12 41.23
Bra035774.1-P Field mustard plasma membrane 43.4 40.64
CDY36036 Canola plasma membrane 43.66 39.34
Bra001790.1-P Field mustard plasma membrane 42.88 39.23
PGSC0003DMT400033459 Potato endoplasmic reticulum 13.2 39.0
HORVU1Hr1G080970.22 Barley extracellular, plasma membrane 39.74 37.44
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 45.88 36.41
CDX86765 Canola extracellular, mitochondrion, vacuole 7.19 33.13
AT1G66980.2 Thale cress plasma membrane 46.41 30.95
CDY14478 Canola plasma membrane 46.27 26.94
CDY60415 Canola plasma membrane 40.0 25.8
HORVU3Hr1G073870.1 Barley extracellular, golgi 12.03 23.53
HORVU6Hr1G074900.1 Barley cytosol 4.84 22.29
HORVU2Hr1G032670.2 Barley cytosol 9.8 22.06
HORVU2Hr1G087820.3 Barley cytosol 8.37 20.71
HORVU1Hr1G024870.4 Barley cytosol 11.24 19.55
HORVU6Hr1G024750.1 Barley extracellular, vacuole 1.18 10.98
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1UniProt:A0A287U5X6ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_dom
EnsemblPlantsGene:HORVU6Hr1G052420EnsemblPlants:HORVU6Hr1G052420.10InterPro:IPR017946InterPro:IPR030395PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF2SUPFAM:SSF51695SignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI000B46AF1FSEG:seg::::
Description
No Description!
Coordinates
chrchr6H:+:322882032..322886549
Molecular Weight (calculated)
82730.2 Da
IEP (calculated)
5.865
GRAVY (calculated)
0.080
Length
765 amino acids
Sequence
(BLAST)
001: VARSLLLSSL LLPGSSWREI VACLAVFLEL LLLLLLLLPL LGPAAAQKGS TWKTLSGNAP AVIAKGGFSG LFPDSSDAAY SFAAGPQDSA LWCDVRLTKD
101: AVGICLPDIK MDNCTTISDL FPKGKKTYRV NGVSTTGWFS VDYTGIELSN VTLLRAILSR TNRFDGSFQI VPVEVALSQY KAPTWLNVQH DSFYSQFNLS
201: MRSYILSMSK QYTVDYISSP EVSFLKSLLG RVGRKTKLVF RFLDEGLVEP STNQTYGSML KNLSSIKTFA SGILVPKHYI WPVTADNYLQ PSTSVVDDAH
301: KADLEIYAAD FANDFALSYN YSYDPLAEYL RFIDNGAFCV DGLLTDFPIT PLEAIGCFTN LNNTKADHGA PLVISHNGAS GDHPDCTDLA YQKAVADGAD
401: VIDCAVQVTK DGIPICMSSI DLMDVTTVAS SQFSSQAGVI NDIKAVAGVY TFNLTWEDIA NNLKPMISNP FGKSTLSRNP RSRNAGKFMR LSDFLAFAKG
501: EDLSGIMITV EHASFMAEKL GFGVVDAVIK AVDDSGYSKQ TAQKVMIQST NSSTLVKFKQ LAKYNLVYKI DEEVKDAAPS SLADIKKFAD AVSVSIKSVY
601: PETSNFLTNQ TNPLVKSLQS AGLPVYVYLL MNEFLSQPYD FFSDATAQIN ALVHKGVEGG GVDGLITDFP GTAHRYKLNS CRKMGDKTPY YMLPPQRGGL
701: LGVIPDKAAL PPAMAPMPVL TDSDVAEPPL PPVSNTTGPA PSHAASRIRT DAGVMLLVLC ASLLI
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.