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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61647 Canola extracellular, plasma membrane 94.75 93.25
Bra035244.1-P Field mustard plasma membrane 86.0 84.3
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 52.62 78.2
Bra034037.1-P Field mustard extracellular, vacuole 74.02 76.82
Bra034040.1-P Field mustard extracellular 13.86 75.74
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 76.72 75.3
AT4G26690.1 Thale cress extracellular, vacuole 76.45 74.84
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 72.14 74.76
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 68.64 67.28
Bra028979.1-P Field mustard plasma membrane 66.35 64.36
PGSC0003DMT400033423 Potato extracellular 10.36 58.78
Bra035208.1-P Field mustard extracellular, golgi, plastid 21.13 57.51
Solyc07g065120.2.1 Tomato extracellular 54.91 54.18
PGSC0003DMT400057418 Potato extracellular 54.64 53.92
KRH73850 Soybean endoplasmic reticulum 53.84 53.12
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 53.97 52.97
Solyc12g014570.1.1 Tomato nucleus 53.43 52.86
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.3 52.59
KRH14296 Soybean endoplasmic reticulum 53.3 52.52
KRH46281 Soybean extracellular, golgi, plasma membrane 53.57 52.3
KRG98625 Soybean extracellular 50.34 51.8
KRH46279 Soybean extracellular 49.93 51.03
KRH46282 Soybean extracellular, plasma membrane 52.22 50.99
KRH46280 Soybean cytosol 17.5 49.43
KRG98622 Soybean extracellular, golgi, plasma membrane 48.99 48.6
GSMUA_Achr8P25690_001 Banana plasma membrane 49.66 48.55
TraesCS6A01G200600.1 Wheat golgi 48.59 48.26
GSMUA_AchrUn_... Banana extracellular 10.63 48.17
EES05342 Sorghum plasma membrane 48.72 48.07
TraesCS6B01G226700.2 Wheat golgi 48.32 48.06
TraesCS6D01G189300.1 Wheat unclear 48.32 48.06
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.69 47.88
Zm00001d050917_P002 Maize plasma membrane 48.45 47.81
HORVU2Hr1G081920.3 Barley plasma membrane 47.64 47.58
TraesCS2D01G332500.1 Wheat golgi 47.64 47.58
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 47.51 47.45
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 47.51 47.45
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 49.93 47.2
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 48.59 47.19
EES10974 Sorghum golgi 47.38 47.0
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.11 46.6
Zm00001d017036_P002 Maize plasma membrane 47.91 46.11
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 59.62 45.95
TraesCS7A01G243900.3 Wheat golgi 47.24 45.64
Bra020384.1-P Field mustard extracellular, plasma membrane 45.76 44.97
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 45.36 44.64
TraesCS7B01G147500.1 Wheat unclear 46.16 44.43
KXG36695 Sorghum plasma membrane 46.03 44.13
Bra020395.1-P Field mustard plasma membrane 44.15 43.91
Zm00001d025670_P001 Maize mitochondrion 9.02 43.79
Zm00001d052875_P001 Maize mitochondrion 45.49 43.56
Bra006785.1-P Field mustard extracellular, plasma membrane 45.09 43.23
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.95 42.99
Zm00001d031412_P001 Maize extracellular 42.8 42.68
GSMUA_Achr3P03920_001 Banana cytosol 45.22 42.53
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 46.3 42.47
Bra035774.1-P Field mustard plasma membrane 46.43 42.23
Bra001790.1-P Field mustard plasma membrane 45.63 40.55
OQU80956 Sorghum cytosol 47.24 39.66
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.88 38.89
Bra003814.1-P Field mustard golgi 12.11 23.02
Bra015928.1-P Field mustard extracellular, golgi, vacuole 12.11 22.9
Bra003813.1-P Field mustard cytosol 12.38 22.33
Bra009316.1-P Field mustard extracellular, vacuole 10.77 21.51
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra004101EnsemblPlants:Bra004101.1EnsemblPlants:Bra004101.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4CIR7PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI00025413FB
SEG:seg:::::
Description
AT1G66970 (E=1e-307) SVL2 | SVL2 (SHV3-LIKE 2); glycerophosphodiester phosphodiesterase/ kinase
Coordinates
chrA07:-:16853346..16856893
Molecular Weight (calculated)
81314.3 Da
IEP (calculated)
5.194
GRAVY (calculated)
-0.070
Length
743 amino acids
Sequence
(BLAST)
001: MGASRVLLCC VVLIQLFAGQ ADAQRSSSPW QTLSGDAPLV IARGGFSGLF PDSSFNAYDF AKQTSVAGAA LWCDVQLTKD GAGICFPDLK LNNASTVEDV
101: YPNRQKTYSV NGVSTQGWFT IDFSLRDLIS NVKLNRGILS RSEKFNGIYA IMTVEDVTTQ IKPESFWLNV QYDAFYAQHN LSMSSFLISA STTVSIDYIS
201: SPEVNFFKKI AGRFGRNGPS FVFQFLGKED FEPTTNRTYG SILSNLTFVK TFASGILVPK SYILPLNDKQ YLLLPPASLV LDAHKAGLQV YVSGFVNDND
301: IAHDYSSDPV SEYLSFVDNG NFSVDGVLSD FPITASASIV DFLVISKNGA SGDYPGCTDM AYDKAIKDGA DVIDCSVQMS SDGKPFCAHS IDLSNITNIA
401: QTPFTKRSTH VPEISSNDGM YTFSLTWSEI QTLKPAISNP YRVYNMFRNP NEKNSGKFIL LSDFLNLAKT STSLSGVLIS VEKAVYLREK QGLDVVKAVL
501: DTLTETGYSN GSTTKTKVMI QSTNSSVLVD FKKQSSKYET VYKVEEKIGD ISDSAIEDIK KFANAVVIGK ETVFPLFDDG FIIRQTNVVE KLHKSKLPVY
601: VEVFQNEFVS QPFDFFSDPT VEINSYVSGA GIDGTITEFP FTAARYKRNR CLGTKESLAP PYMSPVRPGF FLNLVNAIPP AQAPNPVFTD DDVTEPPLPP
701: VTAKSPTSSP GTSFTNAQAP RPSGQTRLTL SLRLSVFASL LLL
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.