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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, extracellular

Predictor Summary:
  • mitochondrion 4
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG36695 Sorghum plasma membrane 91.25 91.48
Zm00001d031412_P001 Maize extracellular 67.83 70.74
Zm00001d052875_P001 Maize mitochondrion 68.34 68.43
TraesCS7B01G147500.1 Wheat unclear 64.61 65.03
TraesCS7A01G243900.3 Wheat golgi 63.71 64.37
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 64.86 62.22
Os09t0339800-00 Rice extracellular, golgi 43.11 59.5
Os12t0456700-01 Rice cytosol 33.85 57.68
Zm00001d050917_P002 Maize plasma membrane 50.71 52.32
Zm00001d017036_P002 Maize plasma membrane 50.71 51.04
PGSC0003DMT400033423 Potato extracellular 8.37 49.62
KRH46280 Soybean cytosol 16.47 48.67
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 30.76 47.8
KRH73850 Soybean endoplasmic reticulum 45.3 46.75
CDY71959 Canola extracellular, plastid, vacuole 19.69 46.65
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 45.3 46.5
KRH14296 Soybean endoplasmic reticulum 44.66 46.02
Zm00001d025670_P001 Maize mitochondrion 9.01 45.75
KRH46281 Soybean extracellular, golgi, plasma membrane 44.27 45.2
Solyc07g065120.2.1 Tomato extracellular 43.76 45.15
Solyc12g014570.1.1 Tomato nucleus 43.63 45.14
PGSC0003DMT400057418 Potato extracellular 43.63 45.02
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 42.99 44.95
AT5G55480.1 Thale cress plasma membrane 44.14 44.78
Bra035244.1-P Field mustard plasma membrane 43.63 44.72
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 43.63 44.72
CDX94294 Canola extracellular, plasma membrane, vacuole 43.5 44.65
PGSC0003DMT400033463 Potato extracellular, plasma membrane 43.24 44.62
CDY61647 Canola extracellular, plasma membrane 43.24 44.5
CDX89312 Canola extracellular, plasma membrane, vacuole 43.24 44.39
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 43.24 44.39
CDY17323 Canola plasma membrane 43.76 44.27
KRG98622 Soybean extracellular, golgi, plasma membrane 42.6 44.19
Bra028979.1-P Field mustard plasma membrane 43.37 43.99
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 40.54 43.93
CDY36746 Canola plasma membrane 43.24 43.86
CDY46687 Canola extracellular, plasma membrane, vacuole 40.41 43.79
KRH46282 Soybean extracellular, plasma membrane 42.73 43.63
CDY72472 Canola mitochondrion 21.11 43.62
AT4G26690.1 Thale cress extracellular, vacuole 42.6 43.61
CDY45656 Canola extracellular, golgi, plasma membrane 36.55 43.49
CDY13237 Canola extracellular, plasma membrane, vacuole 42.47 43.48
CDY29432 Canola cytosol, peroxisome 33.33 43.46
CDX92806 Canola extracellular, plasma membrane, vacuole 39.9 43.3
CDY11996 Canola plasma membrane 42.86 43.08
AT1G66970.2 Thale cress plasma membrane 43.5 43.06
KRG98625 Soybean extracellular 39.9 42.94
CDY19634 Canola plasma membrane 40.03 42.84
Bra034037.1-P Field mustard extracellular, vacuole 39.12 42.46
CDY12605 Canola extracellular, vacuole 39.0 42.32
KRH46279 Soybean extracellular 39.51 42.23
CDY58867 Canola plasma membrane 38.87 41.83
GSMUA_AchrUn_... Banana extracellular 8.75 41.46
AT3G20520.1 Thale cress plasma membrane 38.87 41.43
CDY60410 Canola extracellular 7.21 41.18
CDX86807 Canola cytosol 12.1 40.87
Bra035208.1-P Field mustard extracellular, golgi, plastid 14.03 39.93
Bra034040.1-P Field mustard extracellular 6.95 39.71
CDX82242 Canola cytosol 22.52 39.5
CDY12599 Canola cytosol 20.72 39.46
CDY42328 Canola cytosol 13.0 39.15
Bra035774.1-P Field mustard plasma membrane 41.06 39.05
CDX86766 Canola plasma membrane 31.27 38.39
Zm00001d015609_P002 Maize plasma membrane 37.45 38.24
CDY36036 Canola plasma membrane 40.8 37.34
Bra001790.1-P Field mustard plasma membrane 40.03 37.2
PGSC0003DMT400033459 Potato endoplasmic reticulum 12.1 36.29
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.08 33.92
CDX86765 Canola extracellular, mitochondrion, vacuole 6.18 28.92
AT1G66980.2 Thale cress plasma membrane 42.08 28.51
CDY14478 Canola plasma membrane 43.11 25.49
CDY60415 Canola plasma membrane 37.07 24.28
Zm00001d022067_P001 Maize extracellular 10.17 21.24
Zm00001d012677_P012 Maize golgi 10.55 20.97
Zm00001d033187_P001 Maize plastid 9.65 18.03
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1UniProt:A0A1D6IJQ3GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395ProteinID:ONM59672.1ProteinID:ONM59687.1
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51257PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF6
SUPFAM:SSF51695TMHMM:TMhelixUniParc:UPI00084254A6EnsemblPlantsGene:Zm00001d022153EnsemblPlants:Zm00001d022153_P006EnsemblPlants:Zm00001d022153_T006
SEG:seg:::::
Description
Glycerophosphodiester phosphodiesterase GDPDL3
Coordinates
chr7:+:171356511..171370857
Molecular Weight (calculated)
84346.8 Da
IEP (calculated)
6.601
GRAVY (calculated)
-0.029
Length
777 amino acids
Sequence
(BLAST)
001: MRSNRRRLGG RGGGWGGQGG GVSVAASFAA LLGCVVALVG GAAGQGPRPP SDYKTLSGAA PLVVAKGGFS GVFPDSSQGA YSFAMITSAP DTAMWCDVQL
101: TKDGVGVCLR DINMKNCTSV DQAYPERKRT YVIDGVRKTG WFVSDFTIAE LQSVSLTQAI WPRTRRFDGI YPIISITDFR SLVMPSPVWL NVQHDIFYKQ
201: HGLDMRNYIL SIKKGVSMDY ISSPELGFLK NMSGRVGRKT KLVFRFLEKA LLDHSINQTY GSLSSNLPFI KSIASGIIVP KSYIWPVTKD NYLLPSTSIV
301: TEAHNAGLEI YASDFANDRI IPYNYSYDPL AEYLNFINDG GFSVDGVLSE HPITASEAIG CFTKLNSNKT DHGEPLVISH NGASGDYPDC TDLAYHSAID
401: DGADIIDCPI QVTNDGVLMC MSSTNLLDTT NVQRTTYNSL VSVVPDIQPQ PGIFTFNLTW SDINSNVLKP KISSPVSGYF LVRNPRYTNQ GKFLKLSDFL
501: AIAMDKDLSG VMIIIENAAF LVNSLGIDIV DSLTTALSAA GFDNHPTKEV LIKSKDSDVL VKLKQQKTKC KLVYTLPSGI GDASNSSLKD IKKFAEYVAV
601: DSKSVFTLSS DFIIRQNSLV QDLQSAGLAL YAEVFQNEFV AQPLDFFGDE TVEINYYIQS FNLSGIITDF PKTVRRYKRN TCTVLGKDMP SYMQPPQAGS
701: LAQFLQTFKT QPPSLPPMST LNSSSVEEPP LPTVALRSVS DGSASGATKT PGTPSDAPTA TVNAGMLLVM VFTALLI
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.