Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0503200-01 | Rice | plasma membrane | 64.91 | 38.05 |
| TraesCS7A01G243900.3 | Wheat | golgi | 58.77 | 34.85 |
| KXG36695 | Sorghum | plasma membrane | 58.55 | 34.45 |
| TraesCS7B01G147500.1 | Wheat | unclear | 58.11 | 34.33 |
| Zm00001d022153_P006 | Maize | extracellular, mitochondrion | 57.68 | 33.85 |
| TraesCS7D01G242500.1 | Wheat | golgi, plastid, unclear | 58.77 | 33.09 |
| Os04t0472300-01 | Rice | extracellular, plasma membrane | 53.07 | 32.7 |
| Zm00001d052875_P001 | Maize | mitochondrion | 53.95 | 31.7 |
| Os02t0588500-02 | Rice | extracellular | 51.75 | 31.51 |
| Os09t0339800-00 | Rice | extracellular, golgi | 38.6 | 31.26 |
| Zm00001d031412_P001 | Maize | extracellular | 50.22 | 30.74 |
| OQU80956 | Sorghum | cytosol | 59.43 | 30.62 |
| Os02t0187300-01 | Rice | endoplasmic reticulum, extracellular | 1.97 | 25.0 |
| Os02t0187400-01 | Rice | plasma membrane | 34.43 | 22.33 |
| Os07t0602800-00 | Rice | mitochondrion | 16.67 | 20.38 |
| Os03t0603600-01 | Rice | extracellular | 16.23 | 18.93 |
| Os01t0763600-01 | Rice | extracellular | 16.23 | 18.93 |
| GSMUA_AchrUn_... | Banana | extracellular | 2.41 | 6.71 |
| Os01t0763700-01 | Rice | plastid | 0.22 | 0.66 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | ProteinID:BAF29750.1 | ProteinID:BAT17040.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 | InterPro:IPR030395 | EnsemblPlantsGene:Os12g0456700 |
| EnsemblPlants:Os12t0456700-01 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF6 |
| UniProt:Q0ING5 | SUPFAM:SSF51695 | UniParc:UPI0000DD9E9E | SEG:seg | : | : |
Description
Glycerophosphoryl diester phosphodiesterasePLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os12t0456700-01)
Coordinates
chr12:-:15894622..15897704
Molecular Weight (calculated)
49597.3 Da
IEP (calculated)
4.684
GRAVY (calculated)
-0.010
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: YDPLEEYLSF VSNGGFSVDG VLTDHPLTAS EAIGCFTNLN TSRKTDHGNI LIISHNGASG DYPDCTDLAY EKAVGDGADV IDCSIEMTKD GIPICMSSIN
101: LYDSTDVQNS KFSSLASVVP EIQTKPGIFT FNLTWEEIST LRPKITHPYH DFVRNPRYAN QGKFFKLSDF LTYAKDKDLS GIMIIMKNAA FMAKSLGFDV
201: VDLVTTALSN AGYDNMDPTT KNNKEIMIQS KDSAVLVKLK QRLTQCKLVY SLPLKVGDVS DSCVADIKKF ADAVIVDRES VFAESKGFII RKSKVVEDVQ
301: SAGLAVYVEV FRNEYVSPPV DFFADGTVEI NNYVQLVHVD GFITDFPKTV RRYKMNTCTR QGDGTSTSMK QVPIGDLAQL LDAECSTGGM LPALAPMPVL
401: NSSDVIEPPL PAAEPKSAAG SSATNACVVG VLAPPPLFSS SREYVLLATL LLLQML
101: LYDSTDVQNS KFSSLASVVP EIQTKPGIFT FNLTWEEIST LRPKITHPYH DFVRNPRYAN QGKFFKLSDF LTYAKDKDLS GIMIIMKNAA FMAKSLGFDV
201: VDLVTTALSN AGYDNMDPTT KNNKEIMIQS KDSAVLVKLK QRLTQCKLVY SLPLKVGDVS DSCVADIKKF ADAVIVDRES VFAESKGFII RKSKVVEDVQ
301: SAGLAVYVEV FRNEYVSPPV DFFADGTVEI NNYVQLVHVD GFITDFPKTV RRYKMNTCTR QGDGTSTSMK QVPIGDLAQL LDAECSTGGM LPALAPMPVL
401: NSSDVIEPPL PAAEPKSAAG SSATNACVVG VLAPPPLFSS SREYVLLATL LLLQML
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.