Factsheet for TraesCS7B01G147500.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

mitochondrion 3
extracellular 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	extracellular, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	95.34	90.86
TraesCS7A01G243900.3	Wheat	golgi	86.79	87.13
KXG36695	Sorghum	plasma membrane	66.45	66.19
Zm00001d022153_P006	Maize	extracellular, mitochondrion	65.03	64.61
Zm00001d052875_P001	Maize	mitochondrion	61.92	61.6
Os09t0339800-00	Rice	extracellular, golgi	44.82	61.46
Zm00001d031412_P001	Maize	extracellular	57.51	59.6
OQU80956	Sorghum	cytosol	67.36	58.76
Os12t0456700-01	Rice	cytosol	34.33	58.11
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	54.66	56.72
PGSC0003DMT400033423	Potato	extracellular	9.46	55.73
TraesCS6B01G226700.2	Wheat	golgi	53.11	54.89
KRH46280	Soybean	cytosol	17.49	51.33
KRH14296	Soybean	endoplasmic reticulum	48.06	49.2
KRH73850	Soybean	endoplasmic reticulum	47.8	49.0
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	47.41	48.35
PGSC0003DMT400057418	Potato	extracellular	47.15	48.34
Solyc07g065120.2.1	Tomato	extracellular	47.02	48.21
CDY71959	Canola	extracellular, plastid, vacuole	20.34	47.87
Solyc12g014570.1.1	Tomato	nucleus	46.5	47.8
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	46.5	47.68
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	30.83	47.6
KRH46281	Soybean	extracellular, golgi, plasma membrane	45.85	46.52
AT5G55480.1	Thale cress	plasma membrane	46.11	46.48
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.43	46.16
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.08	45.91
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.49	45.75
AT4G26690.1	Thale cress	extracellular, vacuole	44.95	45.72
CDY46687	Canola	extracellular, plasma membrane, vacuole	42.36	45.61
CDY17323	Canola	plasma membrane	45.34	45.57
CDY61647	Canola	extracellular, plasma membrane	44.56	45.56
Bra028979.1-P	Field mustard	plasma membrane	45.21	45.56
KRG98622	Soybean	extracellular, golgi, plasma membrane	44.17	45.53
Bra035244.1-P	Field mustard	plasma membrane	44.69	45.51
CDX94294	Canola	extracellular, plasma membrane, vacuole	44.56	45.44
CDX89312	Canola	extracellular, plasma membrane, vacuole	44.43	45.31
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.43	45.31
CDY36746	Canola	plasma membrane	44.95	45.3
KRH46282	Soybean	extracellular, plasma membrane	44.43	45.07
CDX92806	Canola	extracellular, plasma membrane, vacuole	41.71	44.97
CDY45656	Canola	extracellular, golgi, plasma membrane	37.82	44.72
KRG98625	Soybean	extracellular	41.71	44.6
CDY72472	Canola	mitochondrion	21.63	44.41
CDY13237	Canola	extracellular, plasma membrane, vacuole	43.65	44.4
AT1G66970.2	Thale cress	plasma membrane	44.95	44.2
KRH46279	Soybean	extracellular	41.32	43.88
CDY12605	Canola	extracellular, vacuole	40.67	43.85
Bra034037.1-P	Field mustard	extracellular, vacuole	40.54	43.72
CDY58867	Canola	plasma membrane	40.41	43.21
CDY11996	Canola	plasma membrane	43.26	43.21
CDY60410	Canola	extracellular	7.51	42.65
CDY29432	Canola	cytosol, peroxisome	32.9	42.62
Bra034040.1-P	Field mustard	extracellular	7.38	41.91
CDY19634	Canola	plasma membrane	39.25	41.74
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	14.64	41.39
CDX86807	Canola	cytosol	12.31	41.3
AT3G20520.1	Thale cress	plasma membrane	38.73	41.02
CDY12599	Canola	cytosol	21.63	40.93
CDX86766	Canola	plasma membrane	32.64	39.81
PGSC0003DMT400033459	Potato	endoplasmic reticulum	13.34	39.77
GSMUA_AchrUn_...	Banana	extracellular	8.42	39.63
TraesCS6B01G202700.1	Wheat	extracellular, plasma membrane	37.69	38.85
CDX82242	Canola	cytosol	22.15	38.6
CDY42328	Canola	cytosol	12.82	38.37
Bra035774.1-P	Field mustard	plasma membrane	40.16	37.94
TraesCS1B01G368600.1	Wheat	extracellular, plasma membrane	36.92	37.45
CDY36036	Canola	plasma membrane	40.67	36.98
Bra001790.1-P	Field mustard	plasma membrane	39.51	36.48
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.49	34.02
CDX86765	Canola	extracellular, mitochondrion, vacuole	6.99	32.53
AT1G66980.2	Thale cress	plasma membrane	43.52	29.29
CDY14478	Canola	plasma membrane	43.78	25.72
CDY60415	Canola	plasma membrane	38.47	25.04
TraesCS2B01G202800.1	Wheat	extracellular, golgi	10.1	21.2
TraesCS3B01G333600.1	Wheat	extracellular, golgi	9.97	19.69
TraesCS1B01G133300.1	Wheat	extracellular	9.72	19.63
TraesCS1B01G133400.2	Wheat	extracellular	9.33	18.65

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395
PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF6	SUPFAM:SSF51695
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS7B01G147500	EnsemblPlants:TraesCS7B01G147500.1	TIGR:cd08603	TIGR:cd08604	SEG:seg

Description

No Description!

Coordinates

chr7B:-:193530415..193535259

Molecular Weight (calculated)

83842.8 Da

IEP (calculated)

7.091

GRAVY (calculated)

-0.064

Length

772 amino acids

Sequence
(BLAST)

001: MRSGRVPGRG GGDGRGGETA ALLCGLLLLL GAADAQGIRR PSSYKTLRGD APLVIAKGGF SGVFPDSSYG AFSFALLASA PDTSLWCDVQ LTKDGVGICL
101: RDINMSNCTN AAQVYPAKNK KEAKYVIDGV PKTGYFSLDF TLSEIQTTIS LTQGIYSRTE RFDTMYYILS VTDFQSNVKP PSVWLNVQRD IFYKQHGLNM
201: RSYIVSILKS VPVKYISSPE LGFLKSISKR VGGRTKLVFR FPDNFLSDPS TNQTYSSLSK NLTFIKTIAS GIMVPKTYIW PVTNDNYLEP PTSFVQDAHS
301: AGLEIYASDF ANDRIIPYNY SYDPLQEYLS FISDGGFSVD GVLTDYPITA SEAIGCFADL NASKADHGKP LIISHNGASG DYPDCTDLAY QNAIKDGADV
401: IDCVLQVTKD RVLICMSSIN LLETTNVQMT PFSSRTSVIP EVRGTPGIFT FNLTWNDISD SSLKPKISSP LSTYYLVRNP RYTNNGKFVK FSDFLEFGKD
501: QDLSGIMIII ENAAFMAKSL GFDVLESLTT ALNDAGYNNQ TTKEVMIQST DSAVLVKLKQ QKAKYKLVYT LPSGIGSASV SSLTDVKEFA EAVVVDRSSF
601: FAQSVHFIIN HTSLLTDLQS AGLTVYAQVF RNEFVSQPWD FFGDETVEIN SYAQSLKVDG LITDFPKTVR RYKRNSCTGL GNDVPSYMGN VTVGGLAQLL
701: KNQAAPQAQP PSVAPMPKLD ASSVQQPPFP PVAPKNAPFG AGPPPGSSPS AAHKTAVSTC ILLVVACATL LL

Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)

001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL

Arabidopsis Description

SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.