Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • mitochondrion 3
  • extracellular 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:extracellular, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052875_P001 Maize mitochondrion 73.02 70.1
Zm00001d022153_P006 Maize extracellular, mitochondrion 70.74 67.83
OQU80956 Sorghum cytosol 77.58 65.31
TraesCS7A01G243900.3 Wheat golgi 59.87 58.0
TraesCS7B01G147500.1 Wheat unclear 59.6 57.51
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 60.0 55.19
PGSC0003DMT400033423 Potato extracellular 9.13 51.91
Os12t0456700-01 Rice cytosol 30.74 50.22
Os09t0339800-00 Rice extracellular, golgi 37.05 49.02
Zm00001d050917_P002 Maize plasma membrane 47.79 47.28
KRH46280 Soybean cytosol 16.51 46.77
Zm00001d025670_P001 Maize mitochondrion 9.53 46.41
Zm00001d017036_P002 Maize plasma membrane 47.79 46.11
CDY71959 Canola extracellular, plastid, vacuole 20.0 45.43
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 28.99 43.2
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 42.68 42.8
AT5G55480.1 Thale cress plasma membrane 43.76 42.56
CDY61647 Canola extracellular, plasma membrane 43.09 42.52
KRH73850 Soybean endoplasmic reticulum 42.95 42.5
KRH14296 Soybean endoplasmic reticulum 42.95 42.44
Bra028979.1-P Field mustard plasma membrane 43.62 42.43
CDY36746 Canola plasma membrane 43.49 42.3
Bra035244.1-P Field mustard plasma membrane 42.95 42.22
CDY60410 Canola extracellular 7.65 41.91
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 42.55 41.88
CDY13237 Canola extracellular, plasma membrane, vacuole 42.55 41.77
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 42.42 41.69
CDX94294 Canola extracellular, plasma membrane, vacuole 42.15 41.48
CDX89312 Canola extracellular, plasma membrane, vacuole 42.15 41.48
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 42.15 41.48
Solyc12g014570.1.1 Tomato nucleus 41.74 41.41
Solyc07g065120.2.1 Tomato extracellular 41.74 41.3
PGSC0003DMT400057418 Potato extracellular 41.61 41.17
CDY17323 Canola plasma membrane 42.42 41.15
KRH46281 Soybean extracellular, golgi, plasma membrane 41.88 41.0
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 39.33 40.86
CDY11996 Canola plasma membrane 42.28 40.75
CDY46687 Canola extracellular, plasma membrane, vacuole 39.19 40.73
PGSC0003DMT400033463 Potato extracellular, plasma membrane 40.94 40.5
AT4G26690.1 Thale cress extracellular, vacuole 41.21 40.45
Bra034040.1-P Field mustard extracellular 7.38 40.44
CDX92806 Canola extracellular, plasma membrane, vacuole 38.79 40.36
Bra035208.1-P Field mustard extracellular, golgi, plastid 14.77 40.29
GSMUA_AchrUn_... Banana extracellular 8.86 40.24
KRG98622 Soybean extracellular, golgi, plasma membrane 40.27 40.05
AT1G66970.2 Thale cress plasma membrane 42.15 40.0
KRH46282 Soybean extracellular, plasma membrane 40.54 39.68
CDY12605 Canola extracellular, vacuole 37.99 39.53
CDY45656 Canola extracellular, golgi, plasma membrane 34.63 39.51
Bra034037.1-P Field mustard extracellular, vacuole 37.72 39.25
CDY58867 Canola plasma membrane 37.72 38.92
CDY72472 Canola mitochondrion 19.6 38.83
KRG98625 Soybean extracellular 37.45 38.64
CDX86807 Canola cytosol 11.81 38.26
KRH46279 Soybean extracellular 37.32 38.24
CDY19634 Canola plasma membrane 36.24 37.19
AT3G20520.1 Thale cress plasma membrane 36.11 36.9
CDY29432 Canola cytosol, peroxisome 29.4 36.74
CDX86766 Canola plasma membrane 30.2 35.55
Zm00001d015609_P002 Maize plasma membrane 35.84 35.09
Bra035774.1-P Field mustard plasma membrane 37.85 34.52
CDY12599 Canola cytosol 18.66 34.07
PGSC0003DMT400033459 Potato endoplasmic reticulum 11.81 33.98
Bra001790.1-P Field mustard plasma membrane 37.99 33.85
CDY36036 Canola plasma membrane 37.58 32.98
CDX82242 Canola cytosol 19.6 32.96
CDY42328 Canola cytosol 10.87 31.4
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 40.54 31.33
CDX86765 Canola extracellular, mitochondrion, vacuole 6.58 29.52
AT1G66980.2 Thale cress plasma membrane 40.0 25.98
CDY14478 Canola plasma membrane 42.95 24.35
CDY60415 Canola plasma membrane 35.84 22.51
Zm00001d022067_P001 Maize extracellular 10.07 20.16
Zm00001d012677_P012 Maize golgi 10.2 19.44
Zm00001d033187_P001 Maize plastid 9.93 17.79
Protein Annotations
EntrezGene:100384038Gene3D:3.20.20.190MapMan:35.1UniProt:A0A1D6KIK0GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395ProteinID:ONM02816.1
ProteinID:ONM02817.1PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51257PFscan:PS51704PANTHER:PTHR43620
PANTHER:PTHR43620:SF6SUPFAM:SSF51695TMHMM:TMhelixUniParc:UPI000221CB4CEnsemblPlantsGene:Zm00001d031412EnsemblPlants:Zm00001d031412_P001
EnsemblPlants:Zm00001d031412_T001SEG:seg::::
Description
Glycerophosphodiester phosphodiesterase GDPDL3
Coordinates
chr1:+:189290752..189294828
Molecular Weight (calculated)
79308.6 Da
IEP (calculated)
6.583
GRAVY (calculated)
0.054
Length
745 amino acids
Sequence
(BLAST)
001: MGRSRRHEGG GGGERRGAGA GGVAAAAFAA LLLGCVVMAL VGGAAAQGPR LPSDYKTLSG AAPLVVARGG FSGAFPDSSE GAYSFGASAS APGTAMWCDV
101: QLTKDGVGLC LRDVNMKNCT TVDQTYPGRK RTYVIDGVHK TGWFVPDFTS AELLQSVYLT QAIWSRTERM DGIYPIVTVP DVQSIVNTSP IWLNVQHPIF
201: YKQRDLDMSS YIHSIRKLVR MDYISSPEIG FLRNISARVR RRTKLVFSFL DKKLLDHSVN QTYGSLARNL TFVRSVASGI LVPKDYIWPV TADNYLLPST
301: SIVTEAHEAG LEIYASGFVN DKAVPFNYSY DPLAEYLNFV GDGGFSVDGV LSDYPITASE AIGCFANLNS SKTDHVTGKP LVISHNGASG DYPDCTDLAY
401: HSAVDDGADV IDCPVQVTSD GVLMCMSSIN LLDTTNVQRT PFATPSLVPS ILINVILSSL INLSSLPQNA AFIAKSLGID MVDSVTAALS AAGFSNQTTK
501: EVLIRSTDSA VLVKLKQQKT RCKLVYTLPL GIGDASKPSL KDIKAFAEAV VVDRTSVFAL SYDFIMGQNR IVRDLQAAGL AVYAQVFRNE YVAHPFDFLG
601: DPTVEINYYV QTFNLSGMIT DFPKTVRRYK ENTCTALGKD MPKYMRPVEA GSLADFLRSF QTQPPSVAPM PALNSSSVEE PPLPTAAPRN VPPGGGAPAD
701: AAGTAGGAAP SDASSGGAPP SDARHTATGS SGMLLVVLVS AALLI
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.