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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400033423 Potato extracellular 15.35 51.91
CDY36036 Canola plasma membrane 97.52 50.88
CDY29432 Canola cytosol, peroxisome 67.95 50.5
Bra001790.1-P Field mustard plasma membrane 93.91 49.76
CDY12599 Canola cytosol 40.41 43.87
AT3G20520.1 Thale cress plasma membrane 69.07 41.98
CDY19634 Canola plasma membrane 67.04 40.91
CDX86807 Canola cytosol 20.09 38.7
PGSC0003DMT400033459 Potato endoplasmic reticulum 22.57 38.61
CDY42328 Canola cytosol 22.12 37.98
CDY45656 Canola extracellular, golgi, plasma membrane 48.08 32.62
CDX86766 Canola plasma membrane 44.24 30.96
CDY11832 Canola cytosol, peroxisome, plastid 10.38 30.07
CDY72472 Canola mitochondrion 25.06 29.52
CDX92806 Canola extracellular, plasma membrane, vacuole 47.4 29.33
CDY46687 Canola extracellular, plasma membrane, vacuole 47.4 29.29
KRH46279 Soybean extracellular 47.86 29.16
CDY12605 Canola extracellular, vacuole 46.73 28.91
Solyc12g014570.1.1 Tomato nucleus 48.76 28.76
CDX89312 Canola extracellular, plasma membrane, vacuole 48.98 28.67
CDY61647 Canola extracellular, plasma membrane 48.76 28.61
PGSC0003DMT400033463 Potato extracellular, plasma membrane 48.53 28.55
CDX94294 Canola extracellular, plasma membrane, vacuole 48.53 28.4
KRG98625 Soybean extracellular 46.28 28.39
CDY13237 Canola extracellular, plasma membrane, vacuole 47.86 27.93
KRH73850 Soybean endoplasmic reticulum 47.4 27.89
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 47.63 27.87
CDY17323 Canola plasma membrane 48.31 27.86
KRH46281 Soybean extracellular, golgi, plasma membrane 47.63 27.73
KRH14296 Soybean endoplasmic reticulum 47.18 27.72
KRH46282 Soybean extracellular, plasma membrane 47.18 27.46
KRG98622 Soybean extracellular, golgi, plasma membrane 45.6 26.97
CDY58867 Canola plasma membrane 43.12 26.45
PGSC0003DMT400057418 Potato extracellular 44.47 26.16
CDY36746 Canola plasma membrane 45.15 26.11
Solyc07g065120.2.1 Tomato extracellular 44.24 26.03
GSMUA_Achr8P25690_001 Banana plasma membrane 44.47 25.92
CDY11996 Canola plasma membrane 44.7 25.61
TraesCS6A01G200600.1 Wheat golgi 43.12 25.53
HORVU2Hr1G081920.3 Barley plasma membrane 42.66 25.4
TraesCS2D01G332500.1 Wheat golgi 42.66 25.4
Zm00001d050917_P002 Maize plasma membrane 43.12 25.37
TraesCS6D01G189300.1 Wheat unclear 42.66 25.3
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 42.44 25.27
EES10974 Sorghum golgi 42.66 25.23
EES05342 Sorghum plasma membrane 42.89 25.23
TraesCS6B01G226700.2 Wheat golgi 42.44 25.17
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 42.21 25.13
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 44.47 25.06
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 2.03 25.0
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 42.21 24.9
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 42.89 24.84
Zm00001d017036_P002 Maize plasma membrane 42.89 24.61
KXG36695 Sorghum plasma membrane 40.41 23.1
TraesCS7A01G243900.3 Wheat golgi 39.95 23.02
CDY32730 Canola plasma membrane 38.37 22.82
GSMUA_Achr3P03920_001 Banana cytosol 40.63 22.78
CDY32720 Canola extracellular, plastid, vacuole 38.6 22.74
CDY43885 Canola extracellular, golgi, plasma membrane 38.37 22.64
CDY02788 Canola plasma membrane 37.92 22.55
Zm00001d022153_P006 Maize extracellular, mitochondrion 39.5 22.52
TraesCS7B01G147500.1 Wheat unclear 38.6 22.15
CDY02800 Canola extracellular, plasma membrane, plastid 37.25 22.06
CDX88656 Canola plasma membrane 38.37 21.94
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 38.83 21.23
CDY11071 Canola extracellular, golgi 18.51 20.97
Zm00001d052875_P001 Maize mitochondrion 36.57 20.88
CDX73068 Canola extracellular 18.51 20.76
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 19.19 20.24
OQU80956 Sorghum cytosol 40.41 20.23
CDX68196 Canola golgi 17.83 19.9
Zm00001d031412_P001 Maize extracellular 32.96 19.6
CDX68195 Canola peroxisome 18.06 19.42
CDX69980 Canola extracellular, golgi, vacuole 15.8 18.82
CDX99041 Canola extracellular 15.8 18.77
CDY11831 Canola extracellular, vacuole 22.8 17.84
CDX85814 Canola extracellular 7.45 16.84
CDX85815 Canola mitochondrion 10.84 16.61
CDY60415 Canola plasma membrane 41.31 15.43
CDY14478 Canola plasma membrane 45.6 15.37
GSMUA_AchrUn_... Banana extracellular 2.93 7.93
KRH46280 Soybean cytosol 3.84 6.46
Zm00001d025670_P001 Maize mitochondrion 0.9 2.61
CDY71959 Canola extracellular, plastid, vacuole 1.58 2.13
CDX86765 Canola extracellular, mitochondrion, vacuole 0.68 1.81
CDY12601 Canola extracellular 0.45 1.47
CDY60410 Canola extracellular 0.45 1.47
CDX71386 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078CZG4EnsemblPlants:CDX82242ProteinID:CDX82242ProteinID:CDX82242.1
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152
GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00137344001InterPro:IPR017946InterPro:IPR030395PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF8SUPFAM:SSF51695UniParc:UPI0004EEED3C
Description
BnaA03g35790D
Coordinates
chrLK031828:-:185469..187683
Molecular Weight (calculated)
49477.7 Da
IEP (calculated)
7.334
GRAVY (calculated)
-0.042
Length
443 amino acids
Sequence
(BLAST)
001: MRNYVVSLSK RYLSFIDNGN FSVDGFLSDF PVTPYRAISC FSHLDTKEDE EPAVVTIISK DGASGDFPGC TDLAYEKAVK DGVDILDCNV QMSKDKIPFC
101: MSSIDLLNTT NVFDTSFRNL SSTVAEIQPK SGIYTFSLTM SQIKTLKPVI TNPKEDHALF RNPRNKNVGK FLTLSEFLFL ANRYNSLLGV LIKVENAVYL
201: AKHQGISVVD AVLNKTERLS TQEGQTTSIA IMFQSTDKSV LMDFKKKKLI YPDELVYRVD EDIRDVTDSA IKEIMSFAGT IVISKESVLP YNGGLVKKKT
301: DVVARLKASG FRVYVETFSN EFVTQPFDLF SDSTVEINFF VQGVKIDGII TDFPATTARY RKSQCYREMG MFRTGELLPF ANPRLLSPAQ APYPLLVESD
401: VMEPPLPDVK SKNSTPTKAM AKAIQVFSPV RTMAVLVIFF ISV
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.