CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009316.1-P	Field mustard	extracellular, vacuole	98.39	98.39
CDX99041	Canola	extracellular	97.58	97.32
AT5G08030.2	Thale cress	golgi	89.25	85.79
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	74.19	69.87
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	72.04	68.89
KRH03139	Soybean	extracellular, golgi	70.97	68.04
KRH56805	Soybean	nucleus	71.51	67.86
Solyc06g069470.2.1	Tomato	extracellular	70.97	67.52
CDY11071	Canola	extracellular, golgi	70.97	67.52
Zm00001d012677_P012	Maize	golgi	70.7	67.26
EES01511	Sorghum	extracellular, golgi	70.43	67.01
CDX73068	Canola	extracellular	70.97	66.84
PGSC0003DMT400010411	Potato	extracellular, golgi	70.16	66.75
CDX68196	Canola	golgi	70.97	66.5
TraesCS3A01G302700.1	Wheat	extracellular, golgi	69.62	66.24
HORVU3Hr1G073870.1	Barley	extracellular, golgi	69.35	65.98
TraesCS3D01G299100.1	Wheat	extracellular, golgi	69.09	65.73
TraesCS3B01G333600.1	Wheat	extracellular, golgi	69.09	65.73
Os01t0763600-01	Rice	extracellular	68.01	64.71
CDX68195	Canola	peroxisome	70.16	63.35
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	68.55	60.71
CDX85815	Canola	mitochondrion	44.89	57.79
CDX85814	Canola	extracellular	26.34	50.0
CDY12599	Canola	cytosol	19.09	17.4
CDX82242	Canola	cytosol	18.82	15.8
CDY42328	Canola	cytosol	10.75	15.5
CDY29432	Canola	cytosol, peroxisome	21.77	13.59
CDX86807	Canola	cytosol	7.53	12.17
CDY45656	Canola	extracellular, golgi, plasma membrane	21.24	12.1
CDX86766	Canola	plasma membrane	20.16	11.85
CDY72472	Canola	mitochondrion	11.83	11.7
CDY12605	Canola	extracellular, vacuole	22.04	11.45
CDY58867	Canola	plasma membrane	22.04	11.36
CDX92806	Canola	extracellular, plasma membrane, vacuole	21.77	11.31
CDY19634	Canola	plasma membrane	22.04	11.29
CDY11832	Canola	cytosol, peroxisome, plastid	4.57	11.11
CDY46687	Canola	extracellular, plasma membrane, vacuole	21.24	11.02
CDY61647	Canola	extracellular, plasma membrane	22.04	10.86
CDY32730	Canola	plasma membrane	21.24	10.6
CDY43885	Canola	extracellular, golgi, plasma membrane	21.24	10.52
CDY02788	Canola	plasma membrane	20.97	10.47
CDX89312	Canola	extracellular, plasma membrane, vacuole	21.24	10.44
CDX94294	Canola	extracellular, plasma membrane, vacuole	21.24	10.44
CDY02800	Canola	extracellular, plasma membrane, plastid	20.97	10.43
CDY32720	Canola	extracellular, plastid, vacuole	20.97	10.37
CDX88656	Canola	plasma membrane	21.51	10.32
CDY17323	Canola	plasma membrane	21.24	10.29
CDY36746	Canola	plasma membrane	20.97	10.18
CDY13237	Canola	extracellular, plasma membrane, vacuole	20.7	10.14
CDY11996	Canola	plasma membrane	20.97	10.09
CDY36036	Canola	plasma membrane	19.89	8.72
CDY11831	Canola	extracellular, vacuole	11.83	7.77
CDY60415	Canola	plasma membrane	21.24	6.66
CDY14478	Canola	plasma membrane	21.24	6.01
CDY71959	Canola	extracellular, plastid, vacuole	1.88	2.13
CDX71386	Canola	extracellular	0.27	0.53
CDY12601	Canola	extracellular	0.0	0.0
Os01t0763700-01	Rice	plastid	0.0	0.0
CDX86765	Canola	extracellular, mitochondrion, vacuole	0.0	0.0
CDY60410	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078BZ21	EnsemblPlants:CDX69980	ProteinID:CDX69980	ProteinID:CDX69980.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00136070001	InterPro:IPR017946	InterPro:IPR030395	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM
UniParc:UPI0004EE80B8	SEG:seg	:	:	:	:

Description

BnaA10g23290D

Coordinates

chrLK031790:+:2554668..2556390

Molecular Weight (calculated)

42392.5 Da

IEP (calculated)

5.848

GRAVY (calculated)

-0.316

Length

372 amino acids

Sequence
(BLAST)

001: MVVKYCLPLL LLSLLIAECA SRPLYTLPSL AKAGTKKPLQ TSRPFNVAHR GANGEFPEET APAYMRAIEE GADFIESDIL STKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT VEELTTLGAK QRYPFRDQQY NGKFPIITLD EYIAIALDAP RVVGIYPEIK NPVFINQQVK WADGKKFEDK
201: IVATLKKYGY KGSYMSKDWL KQPIFIQSFA ATSLVYISNM TDSPKVFLID DVTILTEDTN KTYNEITSDK YLDYIKPYVV GIGPWKDTIV PVSNNRLTTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHSGF HQDAYLEYDY WINKIGVDGL FTDFTGSLHN FQELTSPLPK LQ

Best Arabidopsis Sequence Match ( AT5G08030.1 )
(BLAST)

001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.