CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020384.1-P	Field mustard	extracellular, plasma membrane	99.07	98.55
CDY02800	Canola	extracellular, plasma membrane, plastid	96.54	97.06
CDX71386	Canola	extracellular	20.48	81.48
CDY43885	Canola	extracellular, golgi, plasma membrane	80.72	80.83
CDY32730	Canola	plasma membrane	79.92	80.67
CDY02788	Canola	plasma membrane	79.65	80.4
CDX88656	Canola	plasma membrane	78.86	76.52
CDY11832	Canola	cytosol, peroxisome, plastid	15.56	76.47
CDY11831	Canola	extracellular, vacuole	55.32	73.5
VIT_11s0206g00140.t01	Wine grape	plasma membrane	58.38	58.53
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, peroxisome	42.69	56.41
GSMUA_Achr4P09430_001	Banana	extracellular	51.6	56.4
KRH20083	Soybean	plasma membrane	52.39	51.57
KRH03081	Soybean	extracellular, plasma membrane	51.73	50.92
CDY72472	Canola	mitochondrion	23.27	46.54
PGSC0003DMT400008464	Potato	cytosol	45.48	46.34
Solyc02g014490.2.1	Tomato	unclear	43.88	45.71
CDX94294	Canola	extracellular, plasma membrane, vacuole	45.88	45.57
CDX89312	Canola	extracellular, plasma membrane, vacuole	45.74	45.44
CDY61647	Canola	extracellular, plasma membrane	45.48	45.3
CDY13237	Canola	extracellular, plasma membrane, vacuole	45.21	44.8
PGSC0003DMT400008461	Potato	cytosol	45.74	44.73
CDY12605	Canola	extracellular, vacuole	42.55	44.69
CDY46687	Canola	extracellular, plasma membrane, vacuole	42.55	44.63
CDY45656	Canola	extracellular, golgi, plasma membrane	38.43	44.26
Solyc02g014530.2.1	Tomato	unclear	46.68	44.15
CDX92806	Canola	extracellular, plasma membrane, vacuole	41.89	43.99
CDY17323	Canola	plasma membrane	43.75	42.84
CDY12599	Canola	cytosol	23.14	42.65
CDY29432	Canola	cytosol, peroxisome	32.98	41.61
CDY19634	Canola	plasma membrane	39.89	41.32
CDY36746	Canola	plasma membrane	41.89	41.12
CDY71959	Canola	extracellular, plastid, vacuole	17.55	40.24
CDY11996	Canola	plasma membrane	40.82	39.72
CDY58867	Canola	plasma membrane	37.63	39.2
CDX82242	Canola	cytosol	22.74	38.6
CDX86807	Canola	cytosol	11.7	38.26
CDY60410	Canola	extracellular	6.91	38.24
CDY42328	Canola	cytosol	13.03	37.98
CDY12601	Canola	extracellular	6.78	37.5
CDX86766	Canola	plasma membrane	31.25	37.12
CDY36036	Canola	plasma membrane	39.63	35.1
CDY60415	Canola	plasma membrane	39.49	25.04
CDX86765	Canola	extracellular, mitochondrion, vacuole	5.45	24.7
CDY14478	Canola	plasma membrane	43.09	24.66
CDY11071	Canola	extracellular, golgi	11.7	22.51
CDX68196	Canola	golgi	11.7	22.17
CDX68195	Canola	peroxisome	11.84	21.6
CDX73068	Canola	extracellular	11.17	21.27
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	11.84	21.19
CDX69980	Canola	extracellular, golgi, vacuole	10.37	20.97
CDX99041	Canola	extracellular	9.97	20.11
CDX85814	Canola	extracellular	5.05	19.39
CDX85815	Canola	mitochondrion	6.65	17.3

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078H274	UniProt:A0A078H274	EnsemblPlants:CDY32720	ProteinID:CDY32720
ProteinID:CDY32720.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00052770001	InterPro:IPR017946	InterPro:IPR030395
PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF3	SUPFAM:SSF51695
SignalP:SignalP-noTM	UniParc:UPI0004EECE39	SEG:seg	:	:	:

Description

BnaA02g07820DBnaA02g07820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H274]

Coordinates

chrLK032298:+:331202..334053

Molecular Weight (calculated)

80928.8 Da

IEP (calculated)

7.114

GRAVY (calculated)

0.004

Length

752 amino acids

Sequence
(BLAST)

001: MLRFLILFSL LIHSCVAPPK TKAAAGALPA KKWLTLSGKE PAVVARGGFS GLFPESSATA NDLAISSSSP DLTMLCNLQL TKDGAGFCLS DIRLDNSTTI
101: STFLPKGQKT YKVYGQNLKG WFALDYSADT IFSNVSLVQN IFSRPSIFDG QMSIAAVEDV LDAKPPKFWL SVQYDAFYME HKLSPAEYIR SLRFSGINVI
201: SSPEIGFLKS IGKDARRAKT KLIFEFKDPE TNEPTTNKKY SEILLNLAAI KAFATGIIVP KDYIWPIDSA KYLKPPTTVV TDAHKAGLEV YASGFVNDML
301: TSYNYSFDPS AEYLQFVDNG QFSVDGFISD FPPTASQAIS CFAHQKRDTP KIGKTLVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMTKDGMAFC
401: LDSTDLIPTT TAATTLMTRA TSVPEIQSKN GIFSFDLTWA EIQSLKPQIQ SPFLAADGFP RNPKNKNAGK FMTLADFLNF SKTKAVTGVL INVQNAAYLA
501: SKKGLGIVDA VKSALTSSKL DKKVLIQSDD SSVLDSFKAV PQYTRVLSID KEIGDAPKPT IEEIKKHADA VNVLRSSLVT ISQSFATGKT KIVEAMHKGN
601: ISVYVSVLRN EYLSITFDYF SDPTVELATF IAGNGVDGVI TEFPATATRY LRSPCSDLYR ELSFAILPAK AGTLVSVASK EAQPPASAPN PPLDAKDVMD
701: PPLPPVANLA TNNASGGAPP ASLRSGTIDT TANLSLSLMA MLAFGLLLCA GA

Best Arabidopsis Sequence Match ( AT5G58170.1 )
(BLAST)

001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV

Arabidopsis Description

GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.