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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 94.49 81.4
CDY17323 Canola plasma membrane 94.79 80.6
AT5G55480.1 Thale cress plasma membrane 81.32 69.32
CDY42328 Canola cytosol 26.65 67.44
CDY12599 Canola cytosol 42.11 67.4
CDY36746 Canola plasma membrane 78.25 66.71
CDX86807 Canola cytosol 23.43 66.52
CDY11996 Canola plasma membrane 75.34 63.65
CDY72472 Canola mitochondrion 35.83 62.23
CDX94294 Canola extracellular, plasma membrane, vacuole 72.13 62.22
CDX89312 Canola extracellular, plasma membrane, vacuole 71.82 61.96
CDY46687 Canola extracellular, plasma membrane, vacuole 66.92 60.95
CDX92806 Canola extracellular, plasma membrane, vacuole 66.16 60.34
CDY12605 Canola extracellular, vacuole 66.0 60.2
CDY58867 Canola plasma membrane 64.93 58.73
CDY71959 Canola extracellular, plastid, vacuole 29.1 57.93
CDY61647 Canola extracellular, plasma membrane 66.46 57.48
CDY13237 Canola extracellular, plasma membrane, vacuole 66.0 56.79
CDX86766 Canola plasma membrane 52.37 54.03
PGSC0003DMT400033423 Potato extracellular 10.57 52.67
CDY29432 Canola cytosol, peroxisome 45.02 49.33
CDX82242 Canola cytosol 32.62 48.08
PGSC0003DMT400033459 Potato endoplasmic reticulum 18.99 47.88
KRH46281 Soybean extracellular, golgi, plasma membrane 55.74 47.83
KRH73850 Soybean endoplasmic reticulum 54.67 47.41
KRH14296 Soybean endoplasmic reticulum 54.52 47.21
PGSC0003DMT400057418 Potato extracellular 54.36 47.14
Solyc07g065120.2.1 Tomato extracellular 54.06 46.88
Solyc12g014570.1.1 Tomato nucleus 53.91 46.87
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 53.75 46.37
KRH46282 Soybean extracellular, plasma membrane 53.91 46.25
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.14 46.08
KRG98625 Soybean extracellular 50.84 45.98
KRH46279 Soybean extracellular 51.15 45.94
KRG98622 Soybean extracellular, golgi, plasma membrane 51.3 44.73
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 50.08 43.54
GSMUA_Achr8P25690_001 Banana plasma membrane 50.54 43.42
TraesCS6A01G200600.1 Wheat golgi 48.09 41.98
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 50.38 41.86
EES10974 Sorghum golgi 47.78 41.66
Zm00001d050917_P002 Maize plasma membrane 47.93 41.57
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 47.17 41.4
TraesCS6D01G189300.1 Wheat unclear 47.32 41.37
TraesCS6B01G226700.2 Wheat golgi 47.17 41.23
TraesCS2D01G332500.1 Wheat golgi 46.86 41.13
CDY19634 Canola plasma membrane 45.64 41.05
EES05342 Sorghum plasma membrane 47.32 41.04
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.93 40.91
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 46.55 40.86
HORVU2Hr1G081920.3 Barley plasma membrane 46.55 40.86
Zm00001d017036_P002 Maize plasma membrane 47.17 39.9
KRH46280 Soybean cytosol 15.77 39.16
TraesCS7A01G243900.3 Wheat golgi 46.09 39.14
CDY32720 Canola extracellular, plastid, vacuole 44.26 38.43
CDY43885 Canola extracellular, golgi, plasma membrane 43.95 38.22
CDY32730 Canola plasma membrane 43.34 37.99
CDY02788 Canola plasma membrane 43.34 37.99
CDY02800 Canola extracellular, plasma membrane, plastid 43.49 37.97
TraesCS7B01G147500.1 Wheat unclear 44.72 37.82
CDX88656 Canola plasma membrane 44.1 37.16
KXG36695 Sorghum plasma membrane 44.1 37.16
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.49 36.55
Zm00001d052875_P001 Maize mitochondrion 43.34 36.47
GSMUA_Achr3P03920_001 Banana cytosol 43.64 36.08
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 44.72 36.05
CDY11832 Canola cytosol, peroxisome, plastid 8.42 35.95
CDY11831 Canola extracellular, vacuole 30.63 35.34
CDY36036 Canola plasma membrane 45.79 35.22
Zm00001d031412_P001 Maize extracellular 39.51 34.63
OQU80956 Sorghum cytosol 43.95 32.43
CDY60415 Canola plasma membrane 57.73 31.79
CDY14478 Canola plasma membrane 63.25 31.43
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.68 30.56
CDY11071 Canola extracellular, golgi 13.78 23.02
CDX68196 Canola golgi 13.63 22.42
CDX73068 Canola extracellular 13.17 21.77
CDX69980 Canola extracellular, golgi, vacuole 12.1 21.24
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 13.63 21.19
CDX99041 Canola extracellular 12.1 21.18
CDX68195 Canola peroxisome 13.02 20.63
CDX85814 Canola extracellular 5.97 19.9
CDX85815 Canola mitochondrion 7.5 16.95
CDX71386 Canola extracellular 3.98 13.76
GSMUA_AchrUn_... Banana extracellular 2.91 11.59
CDX86765 Canola extracellular, mitochondrion, vacuole 1.99 7.83
Zm00001d025670_P001 Maize mitochondrion 1.53 6.54
CDY60410 Canola extracellular 1.23 5.88
CDY12601 Canola extracellular 1.07 5.15
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078I730UniProt:A0A078I730EnsemblPlants:CDY45656ProteinID:CDY45656
ProteinID:CDY45656.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_dom
EnsemblPlantsGene:GSBRNA2T00082424001InterPro:IPR017946InterPro:IPR030395PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704
PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695TMHMM:TMhelixUniParc:UPI0004EEA73B:
Description
BnaC09g31980DBnaC09g31980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I730]
Coordinates
chrLK032632:+:89297..98902
Molecular Weight (calculated)
71752.4 Da
IEP (calculated)
5.251
GRAVY (calculated)
-0.018
Length
653 amino acids
Sequence
(BLAST)
001: MKKHRFFGFD VVVISYLVVF LFTNILPNCA VIRGILSRSD AFDNNQYAIS TVQDIAMELK PKSFWLNVQH DAFYGQHNLS ISKFLLSLPK TVTINYLSSP
101: EVTFLQSIGG RFGKAGPKFV FRFLEKDDVE VSTNQTYGTL LGNLTFIKTF ASGVLVPKSY IWPLEDQYLS PHTSFVQDAH KAGLEVYASG FANDLDMAYN
201: YSFDPLAEYL SFMDNGDFSV DGFLSDFPLT ASSAVDCFSH LGSNASTQVD FLVISKNGAS GDYPGCTDLA YSKAIKDGAD IIDCSVQMSL DGIPFCLNSA
301: DLGESTNIVQ SPFRNRSSTV PEIAPLGGLY SFSLTWSEIQ TLRPAITNPY NRDFNLFRNP KERSSGKLVS LSDFLNLAKN STSLAGVLIS VENAAYLREK
401: QGLDVVKAIL DTLTKAGYSN ATTTTKKVMI QSTNSSVLVD FKKQSRYETV YQVEETIRDI LDSAIEDIKK FADAVVVRKN SVFPVSQSFT TGQTNLVERL
501: QRFQLPVYVE LFRNEFVSQP WDFLSDATVE INSHVTGAGI NGTITEFPLT AARYKRNRCL TRKDLPPYMS PVQPAGLLSI MSPTSLPPAE APNPVFTDAD
601: VTEPPLPPVI AKAPTSSPGP LSTDEKAPNG QPRVALSLLL SAFAMVLASL LLL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.