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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 8
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025670_P001 Maize mitochondrion 17.62 86.27
Os04t0472300-01 Rice extracellular, plasma membrane 79.04 80.0
TraesCS2D01G332500.1 Wheat golgi 78.77 79.3
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 78.64 79.17
HORVU2Hr1G081920.3 Barley plasma membrane 78.37 78.9
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 78.24 78.76
EES05342 Sorghum plasma membrane 68.89 68.53
PGSC0003DMT400033423 Potato extracellular 10.68 61.07
GSMUA_Achr8P25690_001 Banana plasma membrane 60.61 59.74
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 61.68 58.78
Solyc12g014570.1.1 Tomato nucleus 53.27 53.13
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.27 52.99
KRH14296 Soybean endoplasmic reticulum 53.0 52.65
KRH73850 Soybean endoplasmic reticulum 52.87 52.59
Solyc07g065120.2.1 Tomato extracellular 52.34 52.06
KXG36695 Sorghum plasma membrane 53.67 51.87
KRH46280 Soybean cytosol 18.02 51.33
PGSC0003DMT400057418 Potato extracellular 51.54 51.26
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 34.05 51.0
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 51.54 50.99
CDY71959 Canola extracellular, plastid, vacuole 21.9 50.0
GSMUA_Achr3P03920_001 Banana cytosol 52.47 49.75
KRH46281 Soybean extracellular, golgi, plasma membrane 50.2 49.41
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 49.53 48.94
KRG98625 Soybean extracellular 47.13 48.89
KRH46279 Soybean extracellular 47.26 48.69
AT5G55480.1 Thale cress plasma membrane 49.67 48.56
KRG98622 Soybean extracellular, golgi, plasma membrane 48.33 48.33
AT4G26690.1 Thale cress extracellular, vacuole 48.87 48.22
CDY17323 Canola plasma membrane 49.4 48.18
KRH46282 Soybean extracellular, plasma membrane 48.87 48.09
CDX94294 Canola extracellular, plasma membrane, vacuole 48.33 47.82
CDY45656 Canola extracellular, golgi, plasma membrane 41.66 47.78
CDX89312 Canola extracellular, plasma membrane, vacuole 48.2 47.69
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 48.2 47.69
CDY36746 Canola plasma membrane 48.73 47.65
CDY72472 Canola mitochondrion 23.9 47.61
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 47.0 47.38
Bra028979.1-P Field mustard plasma membrane 48.33 47.26
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 44.99 47.0
Bra035244.1-P Field mustard plasma membrane 47.53 46.97
CDY61647 Canola extracellular, plasma membrane 47.26 46.89
CDY46687 Canola extracellular, plasma membrane, vacuole 44.86 46.86
CDY13237 Canola extracellular, plasma membrane, vacuole 47.13 46.51
CDX92806 Canola extracellular, plasma membrane, vacuole 44.46 46.51
CDY12605 Canola extracellular, vacuole 44.06 46.09
CDY11996 Canola plasma membrane 47.53 46.05
AT1G66970.2 Thale cress plasma membrane 48.06 45.86
CDY29432 Canola cytosol, peroxisome 36.18 45.47
Bra034037.1-P Field mustard extracellular, vacuole 43.39 45.39
CDY19634 Canola plasma membrane 43.79 45.18
CDY58867 Canola plasma membrane 43.12 44.74
OQU80956 Sorghum cytosol 52.74 44.63
CDY12599 Canola cytosol 23.77 43.63
AT3G20520.1 Thale cress plasma membrane 42.46 43.62
CDY60410 Canola extracellular 7.88 43.38
Bra034040.1-P Field mustard extracellular 7.88 43.38
KXG29647 Sorghum extracellular, plasma membrane 43.52 43.29
CDX82242 Canola cytosol 25.23 42.66
Bra035208.1-P Field mustard extracellular, golgi, plastid 15.22 41.76
CDX86807 Canola cytosol 12.82 41.74
EER90089 Sorghum extracellular, plasma membrane 41.79 41.13
CDY42328 Canola cytosol 14.15 41.09
Bra035774.1-P Field mustard plasma membrane 44.73 41.0
PGSC0003DMT400033459 Potato endoplasmic reticulum 14.15 40.93
CDX86766 Canola plasma membrane 34.31 40.6
CDY36036 Canola plasma membrane 43.52 38.4
Bra001790.1-P Field mustard plasma membrane 42.86 38.4
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 45.93 35.68
CDX86765 Canola extracellular, mitochondrion, vacuole 7.08 31.93
AT1G66980.2 Thale cress plasma membrane 46.86 30.6
CDY14478 Canola plasma membrane 46.46 26.48
CDY60415 Canola plasma membrane 41.12 25.97
EER99675 Sorghum extracellular 11.88 23.92
OQU91395 Sorghum extracellular, plasma membrane 11.48 21.94
EES01511 Sorghum extracellular, golgi 11.35 21.74
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EntrezGene:8058694UniProt:C5YAC3EnsemblPlants:EES10974ProteinID:EES10974
ProteinID:EES10974.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF2EnsemblPlantsGene:SORBI_3006G116000SUPFAM:SSF51695
unigene:Sbi.12610SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A86F15RefSeq:XP_002446646.1SEG:seg
Description
hypothetical protein
Coordinates
chr6:+:48378645..48384916
Molecular Weight (calculated)
82283.7 Da
IEP (calculated)
5.264
GRAVY (calculated)
-0.062
Length
749 amino acids
Sequence
(BLAST)
001: MRRSGRACSV LASLLLLLWL GVAAAQKASS WKTLSGKAPA IVAKGGFSGL FPDSSEYAYQ FALVASSPDT ILYCDVRLTK DEIGICLPDI RMDNCTNIPD
101: FYAQGQKSYL VNGVPTSGWF SVDYNGTELG QVTLKQSINS RTPRFDSSFF ALLAVEDVQS KFKPPGIWLN VQHDSFYSQF NLSMRNYIIS VSKRVVANYI
201: SSPEVSFLTS ILGRISNKTK LVFRFLDEST LEPSMNQTYG SMMKNLTFVK TFASGILVPK SYIWPNSPDN YLQPYTSVVD DAHKAGLEIY AADFANDFLL
301: SYNHSYDPLA EYLSFIDNDV FSVDGVLTDF PVTASEAIGC FTNLNKSNTD HGKPLIISHN GASGDYPGCT DLAYQKAVDD GADVIDCPVQ VTKDGIPICL
401: SSIDLMTDTT IARSQFISQT ATIKDIQIAP GVFSFNLTWD DIVKNLKPKI STPWTNFKLD RNPRYRNAGK FVRLSDFLEF TKDKDLSGIM ISVEHAAFLA
501: GELGFDMVDK VIKALDDAGY HEQTAQKVMI QSADSSVLEK FKEQTKYDLV YMINKEVGDA APSSLADIKK FASAVSVDTS SVFPETHYFT VYETNLVQTL
601: QSAGLSVYVY TLMNEFPSQP YDFFSDATAQ INAYVKGALV DGLITDFPAT ARRYKVNSCM NMGNNTPNFM APVHPGDLMQ SISRSAQPPA LAPIPPLTES
701: DVAQPPLPPA RSNSSTVPTQ SPASRTHACA AHIPVLVTLA ILCTWRSLV
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.