CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022067_P001	Maize	extracellular	91.94	91.94
TraesCS2A01G176400.1	Wheat	extracellular	81.18	82.07
TraesCS2D01G183800.1	Wheat	extracellular	80.91	81.79
TraesCS2B01G202800.1	Wheat	extracellular, golgi	80.65	81.52
HORVU2Hr1G032670.2	Barley	cytosol	70.7	77.35
Os07t0602800-00	Rice	mitochondrion	76.88	76.68
EES01511	Sorghum	extracellular, golgi	66.67	63.43
OQU91395	Sorghum	extracellular, plasma membrane	61.02	57.91
EES10974	Sorghum	golgi	23.92	11.88
EES05342	Sorghum	plasma membrane	23.92	11.82
KXG29647	Sorghum	extracellular, plasma membrane	22.58	11.16
KXG36695	Sorghum	plasma membrane	21.77	10.45
EER90089	Sorghum	extracellular, plasma membrane	20.16	9.86
OQU80956	Sorghum	cytosol	22.04	9.27

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EntrezGene:8079008	UniProt:C5XDU6	EnsemblPlants:EER99675	ProteinID:EER99675
ProteinID:EER99675.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51257	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF4	EnsemblPlantsGene:SORBI_3002G367000
SUPFAM:SSF51695	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83D17	RefSeq:XP_002463154.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:72661802..72663352

Molecular Weight (calculated)

41934.5 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.322

Length

372 amino acids

Sequence
(BLAST)

001: MASLRMALVL ALVTMAASAC GVAARPLVGD GGAWEDRAPL QTSRPFNIAH RGSNGELPEE TAAAYVRAID EGADFIEADI EATKDGHLVC FHDTTLDDTT
101: DVADHPEFAG RRRTLEVQWA NVTGYFITDF TLAELKTLRA KQRWDFRDNS HNGVSPIITF DEFIDIALNA KRVVGIYPEM KSPVFMNKHV RWADGKKFED
201: KFIATLKKYG YGGKYMSPAW RAKPVFVQSF APTSLVRAAD LMDSPLVFLI DDVTVRTEDT NQAYDEITSG EYLDYMKKYV VGIGPWKDTV VPPTKGNLLA
301: TPSDLVAMAH ARGLQVHPYT YRNENEFLHF NFRQDPYAEY DYWINDVGVD GLFTDFPASL RRFQEWTAKK KD

Best Arabidopsis Sequence Match ( AT5G08030.1 )
(BLAST)

001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.