Factsheet for TraesCS2B01G202800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G176400.1	Wheat	extracellular	96.74	96.74
TraesCS2D01G183800.1	Wheat	extracellular	96.74	96.74
HORVU2Hr1G032670.2	Barley	cytosol	79.89	86.47
EER99675	Sorghum	extracellular	81.52	80.65
Zm00001d022067_P001	Maize	extracellular	80.71	79.84
Os07t0602800-00	Rice	mitochondrion	75.0	73.99
TraesCS3B01G333600.1	Wheat	extracellular, golgi	64.13	60.36
TraesCS1B01G133400.2	Wheat	extracellular	63.04	60.1
TraesCS1B01G133300.1	Wheat	extracellular	61.68	59.42
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	26.36	13.04
TraesCS6B01G226700.2	Wheat	golgi	25.27	12.45
TraesCS6B01G202700.1	Wheat	extracellular, plasma membrane	22.83	11.21
TraesCS1B01G368600.1	Wheat	extracellular, plasma membrane	22.83	11.04
TraesCS7B01G147500.1	Wheat	unclear	21.2	10.1

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395
PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF4	SUPFAM:SSF51695
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G202800	EnsemblPlants:TraesCS2B01G202800.1	TIGR:cd08602	SEG:seg

Description

No Description!

Coordinates

chr2B:+:182705927..182707427

Molecular Weight (calculated)

41809.4 Da

IEP (calculated)

5.465

GRAVY (calculated)

-0.328

Length

368 amino acids

Sequence
(BLAST)

001: MASLWVIVAA ALLVLGCASI GATARPLVGA AAAKQPLQTS RPYNIAHRGS NGELPEETAA AFMRAVDEGA DFIEADIVAT KDGHLVCFHD VTLDDTTDVA
101: DHKEFASRRR TLEVQWANVT GYFITDFTLA ELKTLRVKQR WSFRDKSHDG ISPIITFDEF IDIALNAKRV VGIYPEMKSP VFINQQVKWA DGKKYEDKFI
201: GTLKKYGYGG KYMTKRWTER PVFIQSFAPT SLIYAADLTD SPKVFLIDDV TVRTEDTDQS YEEITSDEYL DYMREYVVGI GPWKDTVVPP TRENKLATPT
301: DMVAMAHARG LQVHPYTYRN ENRFLHYNFR QDPYAEYDYW LNTVGVDGLF TDFPASLRRF QEWTAAKN

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.