Factsheet for TraesCS1B01G133400.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G114700.2	Wheat	extracellular	95.34	96.34
TraesCS1A01G113300.1	Wheat	extracellular	94.56	95.55
TraesCS1B01G133300.1	Wheat	extracellular	89.38	90.31
HORVU1Hr1G024870.4	Barley	cytosol	90.41	79.32
OQU91395	Sorghum	extracellular, plasma membrane	77.46	76.28
Os03t0603600-01	Rice	extracellular	76.94	75.96
Zm00001d033187_P001	Maize	plastid	73.06	67.79
TraesCS3B01G333600.1	Wheat	extracellular, golgi	65.03	64.19
TraesCS2B01G202800.1	Wheat	extracellular, golgi	60.1	63.04
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	21.5	11.16
TraesCS6B01G226700.2	Wheat	golgi	20.98	10.84
TraesCS6B01G202700.1	Wheat	extracellular, plasma membrane	20.98	10.81
TraesCS1B01G368600.1	Wheat	extracellular, plasma membrane	20.98	10.64
TraesCS7B01G147500.1	Wheat	unclear	18.65	9.33

Protein Annotations

EnsemblPlants:TraesCS1B01G133400.2	EnsemblPlantsGene:TraesCS1B01G133400	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	PFAM:PF03009	PFscan:PS51704
SignalP:SignalP-noTM	SUPFAM:SSF51695	TIGR:cd08602	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1B:+:168621686..168624271

Molecular Weight (calculated)

44256.3 Da

IEP (calculated)

6.682

GRAVY (calculated)

-0.434

Length

386 amino acids

Sequence
(BLAST)

001: MDSLWHASVI VLVLVFIGGS DANPAARRHG QLDVNHKKQP LQTSRPYNIA HRGSNGEIPE ETAAAYLRAI EEGADFIETD ILASEDGHLI CFHDVTLENT
101: TDIASRTEFA GRKRTYEVEG VNMTGWFTVD FTLRELKSLR VKQRFSFRDQ QYNGKYNILT FDEFILIALH ADRVVGIYPE IKNPIFINQQ VKWSGGKKFE
201: DKFVETLLKY GYKGKYMSED WLKKPLFIQS FAPTSLIYIS NITNAPKLLL IDDTTVPTQD TNQVRSASYY EITSNGYLAF IRKHVIGIGP WKDTIVPPEN
301: DHLGPATDLV ARAHALNLQV HPYTFRNENS YLHFNFHQDP YAEYEYWLRE IGVDALFTDF TGSLHKYQEW TAPHQNKEKK CKGPPA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.