Factsheet for TraesCS1A01G113300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G114700.2	Wheat	extracellular	96.6	96.6
TraesCS1B01G133400.2	Wheat	extracellular	95.55	94.56
TraesCS1A01G113200.1	Wheat	extracellular	91.1	91.1
HORVU1Hr1G024870.4	Barley	cytosol	91.62	79.55
OQU91395	Sorghum	extracellular, plasma membrane	78.53	76.53
Os03t0603600-01	Rice	extracellular	77.49	75.7
Zm00001d033187_P001	Maize	plastid	74.35	68.27
TraesCS3A01G302700.1	Wheat	extracellular, golgi	65.44	63.94
TraesCS2A01G176400.1	Wheat	extracellular	60.99	63.32
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	21.99	11.29
TraesCS6A01G200600.1	Wheat	golgi	21.47	10.96
TraesCS6A01G174100.1	Wheat	extracellular, plasma membrane, vacuole	21.2	10.81
TraesCS1A01G353200.1	Wheat	extracellular, plasma membrane	20.68	10.38
TraesCS7A01G243900.3	Wheat	golgi	20.16	10.01

Protein Annotations

EnsemblPlants:TraesCS1A01G113300.1	EnsemblPlantsGene:TraesCS1A01G113300	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	PFAM:PF03009	PFscan:PS51704
SignalP:SignalP-noTM	SUPFAM:SSF51695	TIGR:cd08602	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1A:+:115975863..115978443

Molecular Weight (calculated)

43967.1 Da

IEP (calculated)

6.710

GRAVY (calculated)

-0.433

Length

382 amino acids

Sequence
(BLAST)

001: MDSLWHASVI VLVLLTIGGS DANPAARRHG QLDVNHKKQP LQTSRPYNIA HRGSNGEIPE ETAAAYLRAI EEGADFIETD ILASEDGHLI CFHDVTLDDT
101: TDIANRTEFV GRKRTYEVQG VNMTGWFTVD FTLRELKSLR VKQRFSFRDQ QYNGKYNILT FDEFILIALH ADRVVGIYPE IKNPIFINQH VKWSGGKKFE
201: DKFVETLLKY GYKGKYMSED WLKKPLFIQS FAPTSLIYIS NITNAPKLLL IDETTVPTQD TNQSYYEITS NGYLAFISKY VIGIGPWKDT IIPPENNLLG
301: PATDLVARAH ALNLQVHPYT FRNENSYLHF NFHQDPYAEY EYWLREIRVD ALFTDFTGSL RKYQEWTAPH QNKEKKCRGP PA

Best Arabidopsis Sequence Match ( AT5G08030.2 )
(BLAST)

001: MQCGRWRNFS SSNSVMAFKY LLPLLLLSLL VANCASRPLY RLPSEAKHAT KKPLQTSRPY NLAHRGSNGE LPEETAPAYM RAIEEGADFI ETDILSSKDG
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.