Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 97.7 | 97.7 |
| TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 96.93 | 96.93 |
| HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 95.91 | 95.91 |
| Zm00001d012677_P012 | Maize | golgi | 86.7 | 86.7 |
| EES01511 | Sorghum | extracellular, golgi | 86.7 | 86.7 |
| Os01t0763600-01 | Rice | extracellular | 85.68 | 85.68 |
| GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 72.38 | 72.75 |
| VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 72.38 | 71.65 |
| KRH56805 | Soybean | nucleus | 70.59 | 70.41 |
| KRH03139 | Soybean | extracellular, golgi | 69.82 | 70.36 |
| Bra009316.1-P | Field mustard | extracellular, vacuole | 66.5 | 69.89 |
| Solyc06g069470.2.1 | Tomato | extracellular | 69.82 | 69.82 |
| CDX69980 | Canola | extracellular, golgi, vacuole | 66.24 | 69.62 |
| CDX99041 | Canola | extracellular | 66.24 | 69.44 |
| PGSC0003DMT400010411 | Potato | extracellular, golgi | 69.31 | 69.31 |
| AT5G08030.2 | Thale cress | golgi | 67.52 | 68.22 |
| CDX73068 | Canola | extracellular | 66.75 | 66.08 |
| AT1G74210.1 | Thale cress | extracellular | 65.73 | 65.56 |
| Bra003814.1-P | Field mustard | golgi | 65.47 | 65.47 |
| TraesCS1A01G113300.1 | Wheat | extracellular | 63.94 | 65.44 |
| Bra015928.1-P | Field mustard | extracellular, golgi, vacuole | 65.73 | 65.39 |
| CDY11071 | Canola | extracellular, golgi | 65.22 | 65.22 |
| TraesCS1A01G113200.1 | Wheat | extracellular | 63.68 | 65.18 |
| TraesCS2A01G176400.1 | Wheat | extracellular | 60.61 | 64.4 |
| CDX68196 | Canola | golgi | 64.96 | 63.98 |
| Bra003813.1-P | Field mustard | cytosol | 65.22 | 61.89 |
| CDX68195 | Canola | peroxisome | 64.96 | 61.65 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 65.47 | 60.95 |
| CDX85815 | Canola | mitochondrion | 41.69 | 56.4 |
| CDX85814 | Canola | extracellular | 27.11 | 54.08 |
| TraesCS6A01G200600.1 | Wheat | golgi | 25.06 | 13.1 |
| TraesCS6A01G174100.1 | Wheat | extracellular, plasma membrane, vacuole | 24.04 | 12.55 |
| TraesCS1A01G353200.1 | Wheat | extracellular, plasma membrane | 24.3 | 12.48 |
| TraesCS2A01G330200.1 | Wheat | extracellular, plasma membrane, vacuole | 22.76 | 11.96 |
| TraesCS7A01G243900.3 | Wheat | golgi | 20.46 | 10.4 |
| Os01t0763700-01 | Rice | plastid | 0.26 | 0.66 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G302700.1 | EnsemblPlantsGene:TraesCS3A01G302700 | Gene3D:3.20.20.190 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 |
| InterPro:IPR030395 | InterPro:PLC-like_Pdiesterase_TIM-brl | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF5 | PFAM:PF03009 | PFscan:PS51704 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF51695 | TIGR:cd08602 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3A:-:536634917..536639928
Molecular Weight (calculated)
45128.4 Da
IEP (calculated)
5.876
GRAVY (calculated)
-0.329
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSLCHVPF LLLLLLHVVI ARPFFPLPSK TSNEEKKPIQ TFRPYNIAHR GSNGEIPEET SGAYLRAIEE GADFIETDIL ASKDGALICF HDVTLDDTTD
101: ISSRKEFANR RRTYEVEWAN VTGWFVVDFT LEELKTLKVK QRYPFRDQQY NGKFSIITFE EFISIALDAS RTIGIYPEIK DPVFINKHVK WADGKKFEDK
201: FVDTLLKYGY RGQYMSENWL KQPLFIQSFA PSSLVHVSKL TDSPKIFLID DITVRTQDTN QSYWEITSDD YLAYISNYVV GLGPWKDTIV PVANNYLLEP
301: TDLVARAHAH NLQVHPYTYR NENQFLHFDF HQDPYAEYDF WINTMGVDGL FTDFAGSVHK YQELKSPHPK DATANSLLVK IAQLIAAYEG H
101: ISSRKEFANR RRTYEVEWAN VTGWFVVDFT LEELKTLKVK QRYPFRDQQY NGKFSIITFE EFISIALDAS RTIGIYPEIK DPVFINKHVK WADGKKFEDK
201: FVDTLLKYGY RGQYMSENWL KQPLFIQSFA PSSLVHVSKL TDSPKIFLID DITVRTQDTN QSYWEITSDD YLAYISNYVV GLGPWKDTIV PVANNYLLEP
301: TDLVARAHAH NLQVHPYTYR NENQFLHFDF HQDPYAEYDF WINTMGVDGL FTDFAGSVHK YQELKSPHPK DATANSLLVK IAQLIAAYEG H
001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ
Arabidopsis Description
PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.