Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009316.1-P | Field mustard | extracellular, vacuole | 97.86 | 98.12 |
| CDX69980 | Canola | extracellular, golgi, vacuole | 97.32 | 97.58 |
| AT5G08030.2 | Thale cress | golgi | 89.01 | 85.79 |
| VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 73.73 | 69.62 |
| GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 72.12 | 69.15 |
| KRH03139 | Soybean | extracellular, golgi | 70.78 | 68.04 |
| KRH56805 | Soybean | nucleus | 71.31 | 67.86 |
| Solyc06g069470.2.1 | Tomato | extracellular | 70.78 | 67.52 |
| CDY11071 | Canola | extracellular, golgi | 70.78 | 67.52 |
| CDX73068 | Canola | extracellular | 71.05 | 67.09 |
| Zm00001d012677_P012 | Maize | golgi | 70.24 | 67.01 |
| EES01511 | Sorghum | extracellular, golgi | 69.97 | 66.75 |
| PGSC0003DMT400010411 | Potato | extracellular, golgi | 69.97 | 66.75 |
| CDX68196 | Canola | golgi | 70.78 | 66.5 |
| TraesCS3A01G302700.1 | Wheat | extracellular, golgi | 69.44 | 66.24 |
| HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 69.17 | 65.98 |
| TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 68.9 | 65.73 |
| TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 68.9 | 65.73 |
| Os01t0763600-01 | Rice | extracellular | 67.83 | 64.71 |
| CDX68195 | Canola | peroxisome | 70.24 | 63.59 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 68.63 | 60.95 |
| CDX85815 | Canola | mitochondrion | 45.04 | 58.13 |
| CDX85814 | Canola | extracellular | 26.54 | 50.51 |
| CDY12599 | Canola | cytosol | 19.03 | 17.4 |
| CDY42328 | Canola | cytosol | 10.99 | 15.89 |
| CDX82242 | Canola | cytosol | 18.77 | 15.8 |
| CDY29432 | Canola | cytosol, peroxisome | 21.18 | 13.26 |
| CDX86807 | Canola | cytosol | 7.51 | 12.17 |
| CDY45656 | Canola | extracellular, golgi, plasma membrane | 21.18 | 12.1 |
| CDX86766 | Canola | plasma membrane | 20.11 | 11.85 |
| CDY72472 | Canola | mitochondrion | 11.8 | 11.7 |
| CDY12605 | Canola | extracellular, vacuole | 21.98 | 11.45 |
| CDY58867 | Canola | plasma membrane | 21.98 | 11.36 |
| CDX92806 | Canola | extracellular, plasma membrane, vacuole | 21.45 | 11.17 |
| CDY11832 | Canola | cytosol, peroxisome, plastid | 4.56 | 11.11 |
| CDY19634 | Canola | plasma membrane | 21.18 | 10.88 |
| CDY46687 | Canola | extracellular, plasma membrane, vacuole | 20.91 | 10.88 |
| CDY61647 | Canola | extracellular, plasma membrane | 21.98 | 10.86 |
| CDX89312 | Canola | extracellular, plasma membrane, vacuole | 21.18 | 10.44 |
| CDX94294 | Canola | extracellular, plasma membrane, vacuole | 21.18 | 10.44 |
| CDY17323 | Canola | plasma membrane | 21.18 | 10.29 |
| CDY32730 | Canola | plasma membrane | 20.38 | 10.2 |
| CDY13237 | Canola | extracellular, plasma membrane, vacuole | 20.64 | 10.14 |
| CDY43885 | Canola | extracellular, golgi, plasma membrane | 20.38 | 10.12 |
| CDY02788 | Canola | plasma membrane | 20.11 | 10.07 |
| CDY36746 | Canola | plasma membrane | 20.64 | 10.05 |
| CDY02800 | Canola | extracellular, plasma membrane, plastid | 20.11 | 10.03 |
| CDY32720 | Canola | extracellular, plastid, vacuole | 20.11 | 9.97 |
| CDY11996 | Canola | plasma membrane | 20.64 | 9.96 |
| CDX88656 | Canola | plasma membrane | 20.64 | 9.94 |
| CDY36036 | Canola | plasma membrane | 19.84 | 8.72 |
| CDY11831 | Canola | extracellular, vacuole | 11.26 | 7.42 |
| CDY60415 | Canola | plasma membrane | 20.91 | 6.58 |
| CDY14478 | Canola | plasma membrane | 21.18 | 6.01 |
| CDY71959 | Canola | extracellular, plastid, vacuole | 1.88 | 2.13 |
| CDX71386 | Canola | extracellular | 0.0 | 0.0 |
| Os01t0763700-01 | Rice | plastid | 0.0 | 0.0 |
| CDX86765 | Canola | extracellular, mitochondrion, vacuole | 0.0 | 0.0 |
| CDY12601 | Canola | extracellular | 0.0 | 0.0 |
| CDY60410 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | GO:A0A078ED44 | EnsemblPlants:CDX99041 | ProteinID:CDX99041 | ProteinID:CDX99041.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:GP_PDE_dom | EnsemblPlantsGene:GSBRNA2T00107171001 | InterPro:IPR017946 | InterPro:IPR030395 | PFAM:PF03009 |
| InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF5 | SUPFAM:SSF51695 | SignalP:SignalP-noTM |
| UniParc:UPI0004EE0C79 | SEG:seg | : | : | : | : |
Description
BnaC09g47940D
Coordinates
chrLK031907:-:1271979..1273932
Molecular Weight (calculated)
42469.5 Da
IEP (calculated)
5.851
GRAVY (calculated)
-0.343
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVKYCLPL LLLSLLIAEC ASRPLYTLPS LAKSGTKKPL QTSRPFNVAH RGANGEFPEE TAPSYMRAIE EGADFIESDI LSTKDGVLIC HHDVNLDDTT
101: DVADHKEFAD RKRTYEVQGM NMTGFFTVDF TLEELKTLGA KQRYPFRDQQ YNGKFPIITL DEYIAIALDA TRVVGIYPEI KNPVFINQQV KWADGKKFED
201: KIVATLKKYG YKGSYMSKDW LKQPIFIQSF AATSLVYISN MTDSPKVFLI DDVTILTEDT NKTYAEITSD KYLDYIKPYV VGIGPWKDTI VPVDNNRLTT
301: PTDLVARAHS RNLQVHPYTY RNENQFLHSG FHQDAYLEYD YWINKIGVDG LFTDFTGSLH NFQELTSPLP KLQ
101: DVADHKEFAD RKRTYEVQGM NMTGFFTVDF TLEELKTLGA KQRYPFRDQQ YNGKFPIITL DEYIAIALDA TRVVGIYPEI KNPVFINQQV KWADGKKFED
201: KIVATLKKYG YKGSYMSKDW LKQPIFIQSF AATSLVYISN MTDSPKVFLI DDVTILTEDT NKTYAEITSD KYLDYIKPYV VGIGPWKDTI VPVDNNRLTT
301: PTDLVARAHS RNLQVHPYTY RNENQFLHSG FHQDAYLEYD YWINKIGVDG LFTDFTGSLH NFQELTSPLP KLQ
001: MQCGRWRNFS SSNSVMAFKY LLPLLLLSLL VANCASRPLY RLPSEAKHAT KKPLQTSRPY NLAHRGSNGE LPEETAPAYM RAIEEGADFI ETDILSSKDG
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
Arabidopsis Description
PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.