CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60410	Canola	extracellular	27.13	65.44
CDY12601	Canola	extracellular	25.3	61.03
CDX86765	Canola	extracellular, mitochondrion, vacuole	28.35	56.02
Zm00001d025670_P001	Maize	mitochondrion	20.12	43.14
CDY17323	Canola	plasma membrane	98.17	41.93
GSMUA_AchrUn_...	Banana	extracellular	17.68	35.37
CDX71386	Canola	extracellular	19.51	33.86
CDY36746	Canola	plasma membrane	78.66	33.68
CDY11996	Canola	plasma membrane	79.27	33.64
CDY72472	Canola	mitochondrion	33.84	29.52
CDY45656	Canola	extracellular, golgi, plasma membrane	57.93	29.1
CDY58867	Canola	plasma membrane	63.72	28.95
CDX89312	Canola	extracellular, plasma membrane, vacuole	63.11	27.34
CDX94294	Canola	extracellular, plasma membrane, vacuole	63.11	27.34
CDY61647	Canola	extracellular, plasma membrane	60.37	26.23
CDY13237	Canola	extracellular, plasma membrane, vacuole	59.76	25.82
CDY12605	Canola	extracellular, vacuole	56.1	25.7
CDX92806	Canola	extracellular, plasma membrane, vacuole	54.57	25.0
CDY46687	Canola	extracellular, plasma membrane, vacuole	54.27	24.83
CDY11831	Canola	extracellular, vacuole	42.38	24.56
GSMUA_Achr8P25690_001	Banana	plasma membrane	52.44	22.63
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	53.66	22.39
TraesCS6D01G189300.1	Wheat	unclear	50.91	22.36
TraesCS6B01G226700.2	Wheat	golgi	50.61	22.22
TraesCS6A01G200600.1	Wheat	golgi	50.3	22.06
Zm00001d050917_P002	Maize	plasma membrane	50.3	21.91
TraesCS2D01G332500.1	Wheat	golgi	49.7	21.91
EES10974	Sorghum	golgi	50.0	21.9
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	49.39	21.77
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	50.61	21.7
EES05342	Sorghum	plasma membrane	49.7	21.65
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	49.09	21.64
HORVU2Hr1G081920.3	Barley	plasma membrane	49.09	21.64
GSMUA_Achr3P03920_001	Banana	cytosol	50.91	21.14
Zm00001d017036_P002	Maize	plasma membrane	49.7	21.11
TraesCS7A01G243900.3	Wheat	golgi	48.48	20.68
TraesCS7B01G147500.1	Wheat	unclear	47.87	20.34
Zm00001d031412_P001	Maize	extracellular	45.43	20.0
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	45.73	19.97
KXG36695	Sorghum	plasma membrane	46.95	19.87
CDY19634	Canola	plasma membrane	43.9	19.83
Zm00001d022153_P006	Maize	extracellular, mitochondrion	46.65	19.69
CDX86766	Canola	plasma membrane	37.5	19.43
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	47.87	19.38
Zm00001d052875_P001	Maize	mitochondrion	45.12	19.07
CDY36036	Canola	plasma membrane	48.78	18.85
CDY32730	Canola	plasma membrane	41.16	18.12
CDY02788	Canola	plasma membrane	40.85	17.99
CDX88656	Canola	plasma membrane	42.07	17.81
CDY43885	Canola	extracellular, golgi, plasma membrane	40.55	17.71
CDY32720	Canola	extracellular, plastid, vacuole	40.24	17.55
OQU80956	Sorghum	cytosol	47.26	17.51
CDY02800	Canola	extracellular, plasma membrane, plastid	39.94	17.51
CDY14478	Canola	plasma membrane	64.02	15.98
CDY29432	Canola	cytosol, peroxisome	27.74	15.27
CDY60415	Canola	plasma membrane	53.96	14.92
CDX85814	Canola	extracellular	2.44	4.08
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	2.74	2.14
CDY11071	Canola	extracellular, golgi	2.44	2.05
CDX68196	Canola	golgi	2.44	2.02
CDX69980	Canola	extracellular, golgi, vacuole	2.13	1.88
CDX99041	Canola	extracellular	2.13	1.88
CDX73068	Canola	extracellular	2.13	1.77
CDX82242	Canola	cytosol	2.13	1.58
CDX68195	Canola	peroxisome	1.83	1.46
CDY12599	Canola	cytosol	0.3	0.25
CDY42328	Canola	cytosol	0.0	0.0
CDY11832	Canola	cytosol, peroxisome, plastid	0.0	0.0
CDX86807	Canola	cytosol	0.0	0.0
CDX85815	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078JZ44	UniProt:A0A078JZ44	EnsemblPlants:CDY71959	ProteinID:CDY71959
ProteinID:CDY71959.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00022694001	InterPro:IPR017946	InterPro:IPR030395
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF1	SUPFAM:SSF51695	SignalP:SignalP-noTM
UniParc:UPI0004EE91D3	SEG:seg	:	:	:	:

Description

BnaCnng75290DBnaCnng75290D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZ44]

Coordinates

chrLK048269:-:2..2233

Molecular Weight (calculated)

36566.8 Da

IEP (calculated)

6.944

GRAVY (calculated)

0.009

Length

328 amino acids

Sequence
(BLAST)

001: MTTYMRDKPS MFGSRASKFL LSALILIQLL PTQLLAQRSK SPWQTLTGSA PLIIARGGFS GLLPDSSVDA YSIVSQTSVS DAVLWCDVQL TKDGVGICFP
101: DVKMMNASSI QDAYSKRKNS YLVNGVPTQD WFTIDFTLKD LKPVFLIRGI LSRSDAFDNN QYAISTVQDI AMELKPKSFW LNVQHDAFYG QHNLSISKFL
201: LSLPKTVTIN YLSSPEVTFL QSIGGRFGKA GPKFVFRFLE KDDVEVSTNQ TYGTLLGNLT FIKTFASGVL VPKSYIWPLE DQYLSPHTSF VQDAHKAGLE
301: VYASGFANDL DMAYNYSFDP LAEYLSFM

Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)

001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL

Arabidopsis Description

SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.