Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG36695 Sorghum plasma membrane 71.3 81.42
Zm00001d031412_P001 Maize extracellular 65.31 77.58
Zm00001d052875_P001 Maize mitochondrion 66.33 75.64
TraesCS7A01G243900.3 Wheat golgi 58.76 67.62
TraesCS7B01G147500.1 Wheat unclear 58.76 67.36
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 59.55 65.06
Os12t0456700-01 Rice cytosol 30.62 59.43
Os09t0339800-00 Rice extracellular, golgi 37.18 58.44
EES05342 Sorghum plasma membrane 45.65 53.65
EES10974 Sorghum golgi 44.63 52.74
PGSC0003DMT400033423 Potato extracellular 7.8 52.67
KRH46280 Soybean cytosol 14.46 48.67
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 27.23 48.2
KRH73850 Soybean endoplasmic reticulum 40.56 47.68
CDY71959 Canola extracellular, plastid, vacuole 17.51 47.26
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 39.66 47.24
KRH14296 Soybean endoplasmic reticulum 40.11 47.08
CDY61647 Canola extracellular, plasma membrane 39.89 46.76
PGSC0003DMT400057418 Potato extracellular 39.77 46.75
KRH46281 Soybean extracellular, golgi, plasma membrane 40.11 46.65
Solyc12g014570.1.1 Tomato nucleus 39.55 46.6
Solyc07g065120.2.1 Tomato extracellular 39.55 46.48
Bra035244.1-P Field mustard plasma membrane 39.77 46.44
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 39.66 46.37
CDY72472 Canola mitochondrion 19.55 46.01
AT5G55480.1 Thale cress plasma membrane 39.77 45.95
PGSC0003DMT400033463 Potato extracellular, plasma membrane 38.98 45.82
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 39.21 45.78
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 36.95 45.61
CDY46687 Canola extracellular, plasma membrane, vacuole 36.84 45.47
CDY17323 Canola plasma membrane 39.44 45.44
CDX94294 Canola extracellular, plasma membrane, vacuole 38.87 45.44
Bra028979.1-P Field mustard plasma membrane 39.32 45.43
CDY13237 Canola extracellular, plasma membrane, vacuole 38.87 45.32
CDY36746 Canola plasma membrane 39.21 45.3
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 38.64 45.18
CDX89312 Canola extracellular, plasma membrane, vacuole 38.64 45.18
KRG98622 Soybean extracellular, golgi, plasma membrane 38.19 45.13
KRH46282 Soybean extracellular, plasma membrane 38.76 45.07
CDX92806 Canola extracellular, plasma membrane, vacuole 36.38 44.97
AT4G26690.1 Thale cress extracellular, vacuole 38.53 44.93
CDY60410 Canola extracellular 6.89 44.85
CDY29432 Canola cytosol, peroxisome 30.06 44.63
CDY11996 Canola plasma membrane 38.76 44.37
Bra034040.1-P Field mustard extracellular 6.78 44.12
CDY45656 Canola extracellular, golgi, plasma membrane 32.43 43.95
AT1G66970.2 Thale cress plasma membrane 38.98 43.95
CDY12605 Canola extracellular, vacuole 35.48 43.85
Bra034037.1-P Field mustard extracellular, vacuole 35.37 43.72
CDY58867 Canola plasma membrane 35.37 43.35
CDY19634 Canola plasma membrane 35.48 43.25
KRG98625 Soybean extracellular 34.92 42.8
KRH46279 Soybean extracellular 34.58 42.09
AT3G20520.1 Thale cress plasma membrane 34.12 41.43
CDY12599 Canola cytosol 19.1 41.42
Bra035208.1-P Field mustard extracellular, golgi, plastid 12.77 41.39
CDX86807 Canola cytosol 10.62 40.87
CDX82242 Canola cytosol 20.23 40.41
KXG29647 Sorghum extracellular, plasma membrane 34.24 40.24
CDX86766 Canola plasma membrane 28.7 40.13
Bra035774.1-P Field mustard plasma membrane 36.61 39.66
GSMUA_AchrUn_... Banana extracellular 7.34 39.63
CDY42328 Canola cytosol 11.41 39.15
EER90089 Sorghum extracellular, plasma membrane 33.33 38.76
PGSC0003DMT400033459 Potato endoplasmic reticulum 11.3 38.61
CDY36036 Canola plasma membrane 35.93 37.46
Bra001790.1-P Field mustard plasma membrane 35.37 37.44
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 39.66 36.41
CDX86765 Canola extracellular, mitochondrion, vacuole 5.65 30.12
AT1G66980.2 Thale cress plasma membrane 37.74 29.12
CDY14478 Canola plasma membrane 39.1 26.33
CDY60415 Canola plasma membrane 33.56 25.04
EER99675 Sorghum extracellular 9.27 22.04
EES01511 Sorghum extracellular, golgi 9.6 21.74
OQU91395 Sorghum extracellular, plasma membrane 9.49 21.43
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EntrezGene:8064042UniProt:A0A1Z5RC44GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395EnsemblPlants:OQU80956
ProteinID:OQU80956ProteinID:OQU80956.1PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620
PANTHER:PTHR43620:SF6EnsemblPlantsGene:SORBI_3007G213300SUPFAM:SSF51695TMHMM:TMhelixUniParc:UPI0001A87A47RefSeq:XP_002445920.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:64206938..64212040
Molecular Weight (calculated)
96351.3 Da
IEP (calculated)
8.148
GRAVY (calculated)
-0.051
Length
885 amino acids
Sequence
(BLAST)
001: MTKRQLAEKK EEEETNRALK RVTERWAQPQ CATFPAYRQM GPVFERGCAY GCYICLPTQR KNTRGRSRQC CCTTAASQQQ PSPLNPRRFS ILPQVPVRRG
101: KVLEASEMRR SRCHEGGGAA AAAAFSALLL GCVVMALVGG AAAQGPRLPS DYKTLSGAAP LVIAKGGFSG VFPDSSQDAY SFAKVASAPG TGTAMWCDVQ
201: LTKDGVGVCL RDINMNNCTT VGQAYPARKR TYVIDGMHKT GWFVSDFTIA ELQSAVYLTQ AIWSRSERFD AIYPIVSVTD FQYLVNMSSP VWLNVQHPIF
301: YKQHGLDMSR YIFSIRKLVS MDYISSPELG FLKNISARVG RKTKLVYSFL DKNLLDHSMN QTYGLLSTNL TFIKSIASGI MVPKDYIWPV TSDNYLRPST
401: SIVTDAHKAG LEIYASDFAN DRIIPYNYSY DPLAEYLNFI SDGGFSVDGV LSDYPITASE AIGCFANLNS SKTDHAEPLV ISHNGASGDY PDCTDLAYHS
501: AIDDGADVID CPVQVTSDGV LMCMSSINLL DTTNVQRTPF ATPPSLVPEI QSTPGIFTFN LTWANISSSA LKPRISSPVS DYYLVRNPRY ANQGNFLKLS
601: DFLAIVMERD LSGAMIIIEN AAYIAKSLGI DIVDSVTTAL SAAGFDNQTA KEVLIQSKDS AVLVKLKQQK TKCKLVYTLP SDIGDASNSS LKDIKKFAHA
701: VVVDRISVFA LSYNFIIRQN RLVHDLQSAG LAVYAQVFRN EFVAVPFDFF GDATVQINYY VQSFNLSGII TDFPKTVRRY KKNTCTVLGK DMPNYMLPVV
801: TGALDQKLQT FQTQPPSVAP MPILNSSSVE EPPLPPAAPR NVPGGGGPSG GATATPGGAP PSDAHHTATV STGMLLVVVS AALLI
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.