CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G087820.3	Barley	cytosol	63.27	80.26
Os03t0603600-01	Rice	extracellular	79.34	79.54
TraesCS1D01G114700.2	Wheat	extracellular	77.04	79.06
TraesCS1D01G114600.1	Wheat	extracellular, vacuole	76.79	78.8
TraesCS1A01G113300.1	Wheat	extracellular	76.53	78.53
TraesCS1B01G133300.1	Wheat	extracellular	76.28	78.27
HORVU6Hr1G024750.1	Barley	extracellular, vacuole	16.33	78.05
TraesCS1A01G113200.1	Wheat	extracellular	75.77	77.75
TraesCS1B01G133400.2	Wheat	extracellular	76.28	77.46
Zm00001d033187_P001	Maize	plastid	81.63	76.92
HORVU6Hr1G074900.1	Barley	cytosol	32.4	76.51
EES01511	Sorghum	extracellular, golgi	67.6	67.77
HORVU1Hr1G024870.4	Barley	cytosol	76.02	67.73
EER99675	Sorghum	extracellular	57.91	61.02
EES05342	Sorghum	plasma membrane	23.21	12.09
KXG29647	Sorghum	extracellular, plasma membrane	22.19	11.55
EES10974	Sorghum	golgi	21.94	11.48
EER90089	Sorghum	extracellular, plasma membrane	20.92	10.78
KXG36695	Sorghum	plasma membrane	20.66	10.45
OQU80956	Sorghum	cytosol	21.43	9.49

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EntrezGene:8062530	UniProt:A0A1Z5S6M7	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom
InterPro:IPR017946	InterPro:IPR030395	EnsemblPlants:OQU91395	ProteinID:OQU91395	ProteinID:OQU91395.1	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	EnsemblPlantsGene:SORBI_3001G171900	SUPFAM:SSF51695
unigene:Sbi.18277	SignalP:SignalP-noTM	UniParc:UPI000B8BA611	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:14365899..14368971

Molecular Weight (calculated)

45316.6 Da

IEP (calculated)

5.901

GRAVY (calculated)

-0.418

Length

392 amino acids

Sequence
(BLAST)

001: MASLTGHDVS LIVLVLLLIG VSNSKASHSQ LDVNHKKPIQ TFRPYNIAHR GSNGELPEET AAAYLRAIEE GADFIETDIL ASKDGHLICF HDVTLDATTN
101: VANHTEFADR KRTYEVQGEN VTGWFIVDFT LKELKSLRVK QRLSFRDQRY NGKYQIITFE EYILIALYAD RIVGIYPEIK NPIFINQHVK WSGGKNFEDK
201: FVEMLLKYGY KGEYMSENWL KQPLFIQSFA PTSLIYISNM TNSPKLFLID DTTIPTQDTN QSYYEITSNS YLTFIRNYVI GIGPWKDTIV PPNPKDNCLG
301: QPTDLVARAH ALNLQVHPYT FRNENQYLHF DFHQDPYSEY EYWLNEIGVD GLFTDFTGSL HKYQQWTTPY QKEKNPEALL REIANMLKND GY

Best Arabidopsis Sequence Match ( AT5G08030.1 )
(BLAST)

001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.