Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58170.1 | EER91265 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | OQU91413 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29647 | Sorghum | extracellular, plasma membrane | 60.71 | 61.35 |
| GSMUA_Achr4P09430_001 | Banana | extracellular | 51.12 | 56.54 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 42.18 | 56.41 |
| VIT_11s0206g00140.t01 | Wine grape | plasma membrane | 52.56 | 53.33 |
| Bra002676.1-P | Field mustard | extracellular, golgi, plasma membrane | 48.09 | 48.48 |
| Bra020384.1-P | Field mustard | extracellular, plasma membrane | 47.96 | 48.28 |
| Bra020395.1-P | Field mustard | plasma membrane | 46.78 | 47.66 |
| AT5G58170.1 | Thale cress | extracellular, plasma membrane | 46.65 | 47.33 |
| AT5G58050.1 | Thale cress | extracellular, plasma membrane | 46.65 | 47.14 |
| KRH20083 | Soybean | plasma membrane | 47.17 | 46.99 |
| Bra006785.1-P | Field mustard | extracellular, plasma membrane | 47.57 | 46.71 |
| KRH03081 | Soybean | extracellular, plasma membrane | 46.39 | 46.2 |
| EES05342 | Sorghum | plasma membrane | 41.92 | 42.36 |
| EES10974 | Sorghum | golgi | 41.13 | 41.79 |
| CDY12601 | Canola | extracellular | 7.23 | 40.44 |
| PGSC0003DMT400008464 | Potato | cytosol | 38.37 | 39.57 |
| Solyc02g014490.2.1 | Tomato | unclear | 37.45 | 39.47 |
| PGSC0003DMT400008461 | Potato | cytosol | 39.68 | 39.27 |
| Solyc02g014530.2.1 | Tomato | unclear | 40.74 | 38.99 |
| KXG36695 | Sorghum | plasma membrane | 37.84 | 37.16 |
| OQU80956 | Sorghum | cytosol | 38.76 | 33.33 |
| EES01511 | Sorghum | extracellular, golgi | 11.04 | 21.48 |
| OQU91395 | Sorghum | extracellular, plasma membrane | 10.78 | 20.92 |
| EER99675 | Sorghum | extracellular | 9.86 | 20.16 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | UniProt:C5Z6L9 | EnsemblPlants:EER90089 | ProteinID:EER90089 | ProteinID:EER90089.2 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 | InterPro:IPR030395 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl |
| PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF3 | EnsemblPlantsGene:SORBI_3010G202000 | SUPFAM:SSF51695 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0007F2F9AF | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:54480991..54484388
Molecular Weight (calculated)
81996.0 Da
IEP (calculated)
5.154
GRAVY (calculated)
0.071
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHAPRNQMG VIYPLMFLFL LLLHGTSAAL KDPVQKWQTL SGAPPLVIAR GGYSGLFPDS SQFGYQFALS NSLPEVVLFC DLQLSSDNVG FCKTGLALDD
101: STLIAKVFPK NDKTYKVNGD GLHGWFSVDF TSNQLMDNVT LIQNVLSRPS IFDGTMGISL IDDVVELHPP QLWINIQYGQ FFLDHKLNIE EYISSKAKEF
201: GVNYVSSPEV GFLKSLSGKL GKSNVKLVFR FLDQQLIEPS TKQPYGTILK DLKSVKAFAS GILVPKTYIW PVNKDQYLQP ATTLVKDAHG LDLEVYAFKF
301: GNDFISSYNY SYDPSAEYLQ FIDSSDFSVD GVLTDFPSTA SAAIACLAHT KDSSLPPPGN DTRPLIITHN GACGLFPGCT DLAYQQAVED GADIIDCSVQ
401: MSKDAVPFCL DSPDLTKGTT AATVFSTKAA TVNEIQNGSG IFAFDLLSSE IQTLKPDLVG PYNQEGLKRN PAAKNSGKLM TLVDFLAFSK SNNISGVLVD
501: VRNAPYLATR GIDIVDAVSS ALINASYDKE TRQQVLIASD DSAVLRAFKK FPAFKRVLQI GNAISDVSKA SVEEMAKFAS AVSITRGSVV QAQGSFLLRF
601: TDVIDKMHAA NLSVYVGLLR NEFMNLGFDF WANPMVEIVT YSSLMADGIV TEFPATAAEY FRSPCSDFSK NLTYTIMPAK PGSLLKLTDP SALPPAQGPA
701: PVLKPADVVD PPLPPVTIST PGASASSNGS STTSGARVST ASSGLCLLAI GLSVLLVTSS K
101: STLIAKVFPK NDKTYKVNGD GLHGWFSVDF TSNQLMDNVT LIQNVLSRPS IFDGTMGISL IDDVVELHPP QLWINIQYGQ FFLDHKLNIE EYISSKAKEF
201: GVNYVSSPEV GFLKSLSGKL GKSNVKLVFR FLDQQLIEPS TKQPYGTILK DLKSVKAFAS GILVPKTYIW PVNKDQYLQP ATTLVKDAHG LDLEVYAFKF
301: GNDFISSYNY SYDPSAEYLQ FIDSSDFSVD GVLTDFPSTA SAAIACLAHT KDSSLPPPGN DTRPLIITHN GACGLFPGCT DLAYQQAVED GADIIDCSVQ
401: MSKDAVPFCL DSPDLTKGTT AATVFSTKAA TVNEIQNGSG IFAFDLLSSE IQTLKPDLVG PYNQEGLKRN PAAKNSGKLM TLVDFLAFSK SNNISGVLVD
501: VRNAPYLATR GIDIVDAVSS ALINASYDKE TRQQVLIASD DSAVLRAFKK FPAFKRVLQI GNAISDVSKA SVEEMAKFAS AVSITRGSVV QAQGSFLLRF
601: TDVIDKMHAA NLSVYVGLLR NEFMNLGFDF WANPMVEIVT YSSLMADGIV TEFPATAAEY FRSPCSDFSK NLTYTIMPAK PGSLLKLTDP SALPPAQGPA
701: PVLKPADVVD PPLPPVTIST PGASASSNGS STTSGARVST ASSGLCLLAI GLSVLLVTSS K
001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
Arabidopsis Description
GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.