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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050917_P002 Maize plasma membrane 87.65 87.65
Zm00001d017036_P002 Maize plasma membrane 88.58 86.4
Os02t0588500-02 Rice extracellular 73.97 74.37
TraesCS6B01G226700.2 Wheat golgi 71.85 72.42
TraesCS6A01G200600.1 Wheat golgi 71.71 72.19
TraesCS6D01G189300.1 Wheat unclear 71.31 71.89
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 72.24 71.11
EES10974 Sorghum golgi 68.53 68.89
GSMUA_Achr8P25690_001 Banana plasma membrane 59.1 58.55
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 59.1 56.62
PGSC0003DMT400033423 Potato extracellular 9.43 54.2
KRH46280 Soybean cytosol 18.19 52.09
KRH73850 Soybean endoplasmic reticulum 52.06 52.06
KRH14296 Soybean endoplasmic reticulum 51.93 51.86
GSMUA_Achr3P03920_001 Banana cytosol 54.32 51.77
KXG36695 Sorghum plasma membrane 53.12 51.61
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 34.26 51.6
Solyc07g065120.2.1 Tomato extracellular 51.13 51.13
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 51.26 50.99
Solyc12g014570.1.1 Tomato nucleus 50.46 50.6
PGSC0003DMT400033463 Potato extracellular, plasma membrane 50.6 50.6
KRH46281 Soybean extracellular, golgi, plasma membrane 50.6 50.07
AT4G26690.1 Thale cress extracellular, vacuole 50.33 49.93
PGSC0003DMT400057418 Potato extracellular 49.93 49.93
CDY71959 Canola extracellular, plastid, vacuole 21.65 49.7
KRH46282 Soybean extracellular, plasma membrane 50.2 49.67
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 49.67 49.34
CDX89312 Canola extracellular, plasma membrane, vacuole 49.14 48.88
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 49.14 48.88
CDX94294 Canola extracellular, plasma membrane, vacuole 49.14 48.88
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 48.07 48.72
CDY17323 Canola plasma membrane 49.67 48.7
AT5G55480.1 Thale cress plasma membrane 49.4 48.56
CDY61647 Canola extracellular, plasma membrane 48.61 48.48
CDY72472 Canola mitochondrion 24.17 48.4
KRG98622 Soybean extracellular, golgi, plasma membrane 47.81 48.06
CDY36746 Canola plasma membrane 48.87 48.04
Bra028979.1-P Field mustard plasma membrane 48.74 47.91
Bra035244.1-P Field mustard plasma membrane 47.94 47.63
CDY12605 Canola extracellular, vacuole 45.15 47.49
KRH46279 Soybean extracellular 45.82 47.46
KRG98625 Soybean extracellular 45.42 47.37
CDY45656 Canola extracellular, golgi, plasma membrane 41.04 47.32
Bra034037.1-P Field mustard extracellular, vacuole 44.75 47.07
CDY11996 Canola plasma membrane 48.21 46.96
CDY13237 Canola extracellular, plasma membrane, vacuole 47.28 46.9
CDY46687 Canola extracellular, plasma membrane, vacuole 44.62 46.86
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 44.62 46.86
CDX92806 Canola extracellular, plasma membrane, vacuole 44.49 46.79
AT1G66970.2 Thale cress plasma membrane 48.74 46.75
OQU80956 Sorghum cytosol 53.65 45.65
CDY29432 Canola cytosol, peroxisome 35.99 45.47
CDY19634 Canola plasma membrane 42.76 44.35
CDY58867 Canola plasma membrane 42.5 44.32
AT3G20520.1 Thale cress plasma membrane 42.76 44.17
CDY12599 Canola cytosol 23.77 43.87
Bra035208.1-P Field mustard extracellular, golgi, plastid 15.8 43.59
CDX82242 Canola cytosol 25.23 42.89
CDY60410 Canola extracellular 7.7 42.65
KXG29647 Sorghum extracellular, plasma membrane 42.63 42.63
CDY42328 Canola cytosol 14.48 42.25
CDX86807 Canola cytosol 12.88 42.17
EER90089 Sorghum extracellular, plasma membrane 42.36 41.92
Bra035774.1-P Field mustard plasma membrane 44.49 41.0
PGSC0003DMT400033459 Potato endoplasmic reticulum 13.94 40.54
CDX86766 Canola plasma membrane 33.73 40.13
Bra001790.1-P Field mustard plasma membrane 44.36 39.95
Bra034040.1-P Field mustard extracellular 7.17 39.71
CDY36036 Canola plasma membrane 44.75 39.69
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 45.42 35.48
CDX86765 Canola extracellular, mitochondrion, vacuole 6.91 31.33
AT1G66980.2 Thale cress plasma membrane 47.41 31.12
CDY14478 Canola plasma membrane 46.48 26.64
CDY60415 Canola plasma membrane 40.77 25.89
EER99675 Sorghum extracellular 11.82 23.92
EES01511 Sorghum extracellular, golgi 12.09 23.27
OQU91395 Sorghum extracellular, plasma membrane 12.09 23.21
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EntrezGene:8055428UniProt:C5XWE5EnsemblPlants:EES05342ProteinID:EES05342
ProteinID:EES05342.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF2EnsemblPlantsGene:SORBI_3004G197600SUPFAM:SSF51695
unigene:Sbi.4893SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A851DERefSeq:XP_002452366.1SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:54869063..54874521
Molecular Weight (calculated)
81755.6 Da
IEP (calculated)
5.042
GRAVY (calculated)
0.042
Length
753 amino acids
Sequence
(BLAST)
001: MGRRSSRACS LLGSAQLLLL LLSLALGSAA AQKGSTWKTL SGKAPVIVAK GGFSGLFPES SLYAYQILGS LSSPDTVMWC DVRLTKDGGG ICLPSIDMDN
101: CTTIANFFPQ GKKTYNVNGV STVGWFSVDY TSTDLLNVSL KQSVLSRTGV YDGIFPIIPV ENVYTQFNPV AVWLNVQQDS FYSQFKLSMR SYILSLLKNF
201: VVDYISSPEV NFLTSISGRV SKKTKLVFRF LDERSIEPST NQTYGSMLKN LTFVKTFASG ILVPKSYIWP VTPDNYLLPY TSVVDDAHKA GLEIYAADFA
301: NDFTISYNYS YDPLAEYLSF IDNGAFSVDG VLSDFPITPS EAVDCFSNLN NSKIDHAKPL VISHNGASGD YPDCTDQAYE KAVADGADVI DCPVQVTKDG
401: ILICMSSVDL MNATTVAKSQ FASQVTTIND LKAGPGVFTF NLTWDDISKN LKPMISNPAI GFNQYRNPRN KNAGNFMRLS DFLTFAKGKD LSGIMITVEH
501: AAFMAEELGF GVVDAVIKAL DDSGYSKQTA QSVMIQSTNS SVLVKFKQET KYNLVYMIEE NVRDAAPSSL ADIKKFASAV SVSTTSVFPE DHYYLTNQTN
601: NLVKSLKSAG LQVYAYVLMN EFGTQPNDFF ADATVQINAY VHVRGANVDG VITDFPGTAH RYKLNSCTSM GKNAPPFMSP PKPGDLLTTM PPFAQPPAAA
701: PMPLLTDADV AEPALPPVSN TTTPASPSDA ALMMRTDVSI LITLLMLCAS LLI
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.