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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12599 Canola cytosol 48.09 15.44
CDX82242 Canola cytosol 51.91 15.35
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 3.82 13.89
CDY72472 Canola mitochondrion 39.69 13.83
PGSC0003DMT400033463 Potato extracellular, plasma membrane 78.63 13.68
Solyc12g014570.1.1 Tomato nucleus 76.34 13.32
PGSC0003DMT400033459 Potato endoplasmic reticulum 25.95 13.13
PGSC0003DMT400057418 Potato extracellular 71.76 12.48
CDX86766 Canola plasma membrane 53.44 11.06
CDY29432 Canola cytosol, peroxisome 49.62 10.91
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 61.83 10.7
EES10974 Sorghum golgi 61.07 10.68
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 40.46 10.6
CDY45656 Canola extracellular, golgi, plasma membrane 52.67 10.57
KRH46281 Soybean extracellular, golgi, plasma membrane 61.07 10.51
CDX92806 Canola extracellular, plasma membrane, vacuole 57.25 10.47
CDY46687 Canola extracellular, plasma membrane, vacuole 57.25 10.46
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 57.25 10.46
CDX86807 Canola cytosol 18.32 10.43
KRH46282 Soybean extracellular, plasma membrane 60.31 10.38
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 58.78 10.36
TraesCS2D01G332500.1 Wheat golgi 58.78 10.35
HORVU2Hr1G081920.3 Barley plasma membrane 58.78 10.35
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 58.78 10.35
KRH14296 Soybean endoplasmic reticulum 59.54 10.34
KRG98622 Soybean extracellular, golgi, plasma membrane 58.78 10.28
KRH73850 Soybean endoplasmic reticulum 58.78 10.23
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 58.02 10.22
CDY12605 Canola extracellular, vacuole 55.73 10.2
CDY61647 Canola extracellular, plasma membrane 58.02 10.07
KRH46279 Soybean extracellular 55.73 10.04
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 58.02 10.04
CDX94294 Canola extracellular, plasma membrane, vacuole 58.02 10.04
CDX89312 Canola extracellular, plasma membrane, vacuole 58.02 10.04
AT4G26690.1 Thale cress extracellular, vacuole 58.02 10.01
GSMUA_Achr8P25690_001 Banana plasma membrane 58.02 10.0
KRG98625 Soybean extracellular 54.96 9.97
Bra034037.1-P Field mustard extracellular, vacuole 54.2 9.92
Bra035244.1-P Field mustard plasma membrane 57.25 9.89
CDY13237 Canola extracellular, plasma membrane, vacuole 57.25 9.88
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 56.49 9.76
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 55.73 9.72
CDY58867 Canola plasma membrane 53.44 9.7
AT5G55480.1 Thale cress plasma membrane 56.49 9.66
CDY17323 Canola plasma membrane 56.49 9.64
TraesCS7A01G243900.3 Wheat golgi 56.49 9.62
AT1G66970.2 Thale cress plasma membrane 57.25 9.55
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 57.25 9.54
TraesCS7B01G147500.1 Wheat unclear 55.73 9.46
EES05342 Sorghum plasma membrane 54.2 9.43
Bra028979.1-P Field mustard plasma membrane 54.96 9.4
CDY36746 Canola plasma membrane 54.2 9.27
TraesCS6D01G189300.1 Wheat unclear 52.67 9.24
TraesCS6B01G226700.2 Wheat golgi 52.67 9.24
TraesCS6A01G200600.1 Wheat golgi 52.67 9.22
Zm00001d050917_P002 Maize plasma membrane 52.67 9.16
Zm00001d031412_P001 Maize extracellular 51.91 9.13
Zm00001d017036_P002 Maize plasma membrane 53.44 9.07
CDY11996 Canola plasma membrane 53.44 9.06
AT3G20520.1 Thale cress plasma membrane 50.38 9.05
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 55.73 9.01
CDY19634 Canola plasma membrane 49.62 8.95
CDY42328 Canola cytosol 17.56 8.91
Zm00001d052875_P001 Maize mitochondrion 51.91 8.76
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 51.15 8.76
Bra001790.1-P Field mustard plasma membrane 54.2 8.49
Zm00001d022153_P006 Maize extracellular, mitochondrion 49.62 8.37
KXG36695 Sorghum plasma membrane 48.85 8.26
CDY36036 Canola plasma membrane 53.44 8.24
Bra035774.1-P Field mustard plasma membrane 50.38 8.08
PGSC0003DMT400008464 Potato cytosol 44.27 7.86
OQU80956 Sorghum cytosol 52.67 7.8
GSMUA_Achr3P03920_001 Banana cytosol 46.56 7.72
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 54.2 7.37
PGSC0003DMT400008461 Potato cytosol 42.75 7.28
KRH46280 Soybean cytosol 13.74 6.84
GSMUA_AchrUn_... Banana extracellular 8.4 6.71
PGSC0003DMT400010411 Potato extracellular, golgi 19.08 6.39
AT1G66980.2 Thale cress plasma membrane 53.44 6.1
CDY14478 Canola plasma membrane 60.31 6.01
CDY60415 Canola plasma membrane 51.91 5.73
Zm00001d025670_P001 Maize mitochondrion 4.58 3.92
Bra035208.1-P Field mustard extracellular, golgi, plastid 5.34 2.56
CDX86765 Canola extracellular, mitochondrion, vacuole 3.05 2.41
Bra034040.1-P Field mustard extracellular 2.29 2.21
CDY60410 Canola extracellular 1.53 1.47
Protein Annotations
EnsemblPlants:PGSC0003DMT400033423EnsemblPlantsGene:PGSC0003DMG400012843GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR030395PANTHER:PTHR43620
PANTHER:PTHR43620:SF1PFscan:PS51704PGSC:PGSC0003DMG400012843SignalP:SignalP-noTMUniParc:UPI000295787EUniProt:M1AZ44
MapMan:35.1:::::
Description
Glycerophosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400012843]
Coordinates
chr12:-:9607375..9611017
Molecular Weight (calculated)
14235.0 Da
IEP (calculated)
3.889
GRAVY (calculated)
0.282
Length
131 amino acids
Sequence
(BLAST)
001: MMYVLLTIIA MIPQTEYLSF IDNGVFSVDG VLSDLPVTAS AIIEKLLIIT SEGASGDYSA PGCTDMVYTK AVSDGADVLD CPVQMTKNGI KIADVVQKLQ
101: SSNLSVYVQR FNNEFVSQAW DFFSDSSVEK T
Best Arabidopsis Sequence Match ( AT1G66970.3 )
(BLAST)
001: MSSFLLSVSR TVSIDFISSP EVNFFKKITG SFGRNGPTFV FQFLGKEDFE PTTNRTYGSI LSNLTFVKTF ASGILVPKSY ILPLDDEQYL VPHTSLVQDA
101: HKAGLQVYVS GFANDVDIAY NYSSDPVSEY LSFVDNGDFS VDGVLSDFPI TASAAVDCFS HIGRNATKQV DFLVISKDGA SGDYPGCTDL AYEKAIKDGA
201: DVIDCSVQMS SDGVPFCLRS IDLRNSIAAL QNTFSNRSTS VPEISSVPGI FTFSLTWPEI QSLTPAISNP FRVYRIFRNP REKNSGKLIS LSQFLDLAKT
301: YTSLSGVLIS VENAAYLREK QGLDVVQAVL DTLTEAGYSN GTTTTKVMIQ STNSSVLVDF KKQSKYETVY KIEETIGNIR DSAIEDIKKF ANAVVINKDS
401: VFPNSDSFLT GQTNVVERLQ KSQLPVYVEL FRNEFVSQAY DFFSDATVEI NAYIYGAGIN GTITEFPFTA ARYKRNRCLG REEVPPYMLP VNPGGLLNVM
501: SPLSLPPAQA PNQDFIEADV TEPPLSPVIA KAPTSTPGTP STIAQAPSGQ TRLKLSLLLS VFFLSLLLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.