Factsheet for Solyc12g014570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	93.08	92.83
PGSC0003DMT400033459	Potato	endoplasmic reticulum	27.7	80.31
PGSC0003DMT400033423	Potato	extracellular	13.32	76.34
Solyc07g065120.2.1	Tomato	extracellular	68.18	67.99
KRH46280	Soybean	cytosol	21.44	61.22
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	58.85	58.39
KRH73850	Soybean	endoplasmic reticulum	58.46	58.3
KRH14296	Soybean	endoplasmic reticulum	58.46	58.22
KRH46281	Soybean	extracellular, golgi, plasma membrane	57.12	56.37
KRG98625	Soybean	extracellular	53.93	56.09
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.32	55.8
CDY17323	Canola	plasma membrane	56.72	55.47
AT4G26690.1	Thale cress	extracellular, vacuole	55.66	55.07
CDY72472	Canola	mitochondrion	27.56	55.05
KRH46279	Soybean	extracellular	53.26	55.02
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	36.62	55.0
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.39	54.95
CDX89312	Canola	extracellular, plasma membrane, vacuole	55.39	54.95
KRH46282	Soybean	extracellular, plasma membrane	55.53	54.8
AT5G55480.1	Thale cress	plasma membrane	55.79	54.7
CDX94294	Canola	extracellular, plasma membrane, vacuole	55.13	54.69
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.2	54.67
CDY46687	Canola	extracellular, plasma membrane, vacuole	52.06	54.53
CDX92806	Canola	extracellular, plasma membrane, vacuole	51.93	54.47
Bra035244.1-P	Field mustard	plasma membrane	54.73	54.22
CDY61647	Canola	extracellular, plasma membrane	54.19	53.91
CDY45656	Canola	extracellular, golgi, plasma membrane	46.87	53.91
CDY13237	Canola	extracellular, plasma membrane, vacuole	54.33	53.75
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.86	53.43
EES10974	Sorghum	golgi	53.13	53.27
CDY12605	Canola	extracellular, vacuole	50.73	53.21
KRG98622	Soybean	extracellular, golgi, plasma membrane	53.0	53.14
HORVU2Hr1G081920.3	Barley	plasma membrane	52.6	53.09
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	52.6	53.09
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	52.46	52.96
TraesCS2D01G332500.1	Wheat	golgi	52.46	52.96
CDY60410	Canola	extracellular	9.59	52.94
Bra034037.1-P	Field mustard	extracellular, vacuole	50.33	52.79
GSMUA_Achr8P25690_001	Banana	plasma membrane	53.4	52.76
Bra028979.1-P	Field mustard	plasma membrane	53.26	52.22
AT1G66970.2	Thale cress	plasma membrane	54.33	51.97
CDY36746	Canola	plasma membrane	53.0	51.96
CDY29432	Canola	cytosol, peroxisome	40.75	51.34
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	53.13	50.76
EES05342	Sorghum	plasma membrane	50.6	50.46
CDY19634	Canola	plasma membrane	48.73	50.41
TraesCS6A01G200600.1	Wheat	golgi	50.07	50.27
AT3G20520.1	Thale cress	plasma membrane	48.73	50.21
TraesCS6D01G189300.1	Wheat	unclear	49.8	50.07
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	50.07	50.07
CDY11996	Canola	plasma membrane	51.53	50.06
Bra034040.1-P	Field mustard	extracellular	9.05	50.0
TraesCS6B01G226700.2	Wheat	golgi	49.53	49.8
Zm00001d050917_P002	Maize	plasma membrane	49.8	49.67
CDY12599	Canola	cytosol	26.76	49.26
CDY58867	Canola	plasma membrane	47.14	49.03
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	49.8	48.89
CDX82242	Canola	cytosol	28.76	48.76
Zm00001d017036_P002	Maize	plasma membrane	49.67	48.32
CDX86807	Canola	cytosol	14.78	48.26
TraesCS7A01G243900.3	Wheat	golgi	48.34	47.2
TraesCS7B01G147500.1	Wheat	unclear	47.8	46.5
CDY42328	Canola	cytosol	15.85	46.12
Zm00001d025670_P001	Maize	mitochondrion	9.32	45.75
CDX86766	Canola	plasma membrane	38.08	45.18
Bra035774.1-P	Field mustard	plasma membrane	49.13	45.17
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	48.6	45.06
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	16.38	45.05
GSMUA_Achr3P03920_001	Banana	cytosol	47.14	44.81
KXG36695	Sorghum	plasma membrane	45.67	44.26
CDY36036	Canola	plasma membrane	49.67	43.93
Zm00001d022153_P006	Maize	extracellular, mitochondrion	45.14	43.63
Bra001790.1-P	Field mustard	plasma membrane	48.34	43.42
Zm00001d052875_P001	Maize	mitochondrion	44.07	42.65
GSMUA_AchrUn_...	Banana	extracellular	9.19	42.07
Zm00001d031412_P001	Maize	extracellular	41.41	41.74
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	50.87	39.63
OQU80956	Sorghum	cytosol	46.6	39.55
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	1.86	38.89
Solyc02g014490.2.1	Tomato	unclear	36.35	37.81
Solyc02g014530.2.1	Tomato	unclear	39.41	37.23
AT1G66980.2	Thale cress	plasma membrane	52.86	34.61
CDX86765	Canola	extracellular, mitochondrion, vacuole	7.59	34.34
CDY14478	Canola	plasma membrane	53.4	30.52
CDY60415	Canola	plasma membrane	46.21	29.26
Solyc06g069470.2.1	Tomato	extracellular	10.92	20.97

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395
UniProt:K4DCZ2	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF1
SUPFAM:SSF51695	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g014570.1	EnsemblPlants:Solyc12g014570.1.1	UniParc:UPI000276A969	SEG:seg

Description

No Description!

Coordinates

chr12:+:5569788..5576277

Molecular Weight (calculated)

83456.2 Da

IEP (calculated)

5.569

GRAVY (calculated)

-0.057

Length

751 amino acids

Sequence
(BLAST)

001: MWNLRSLSWS FVLLTCFSVA AQGVNRTKWL TLNGNAPLVI ARGGFSGLLP DSSYDAYIMG LETSLPNAII WCDVQLTKDG VGICFPDLKL DNASDIDFYF
101: KNKKSKYLVN GVPTQGWFSI DYNLKDLVHV TLKQGVYSRT QRFDGSQQSI LTVQDVVNQV KPPGFWLNIQ HDNFFSQHNL SMKSYIISLT RGVLINYISS
201: PEVNFLRSIL SRLNPRVTKL VFRFLGQDDV EPSTNQTYGS LLKNLTFIKT FASGILVPKS YIWPVDNSLY LQPYTSLVLD AHKEGLQIFA SEFANDVPFA
301: YNYSYDPTSE YLSFVDNGNF SVDGVLSDFP VTPSATIDCF THLDKNDKPQ EKLLVITSEG ASGDYPGCTD LAYTKAASDG ADVLDCPVQM AKDGIPFCLG
401: SINLIDKTTV FRSPFINIAS TVPELNITNG IFTFNLTWDE IKSLKPEITN PWLEFRLYRN PKARNEGNFV SLMEFLTYAK NATTVSGVMI SIENAAYLAN
501: QGFGVTDAVL EALRNAGYNN QTAKKVMIQS KDSSVLKEFK KNRYELVYRV ADDISDIESS TISEIRSFAS SVILTKKSVF PSESQFLVGK TNVVEKLHSS
601: NLSVYVQHFN NEFVSQPWDF FSDSSVEINN YFVGAGIDGI ITDFPRTAAR YRRNRCLHYK VPPMYFSLVS PGVLQQFMSR QSLPPAEAPS PILTESDVVE
701: PPLPPVAKIT PTARNESTAS AAPTSPTGQS SVVAGVFTSC LTILLADLVI F

Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)

001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL

Arabidopsis Description

GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.