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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86807 Canola cytosol 40.93 46.09
CDY42328 Canola cytosol 38.22 38.37
PGSC0003DMT400033463 Potato extracellular, plasma membrane 83.01 28.55
Solyc12g014570.1.1 Tomato nucleus 80.31 27.7
PGSC0003DMT400033423 Potato extracellular 13.13 25.95
CDY12599 Canola cytosol 39.38 25.0
CDX82242 Canola cytosol 38.61 22.57
PGSC0003DMT400057418 Potato extracellular 62.93 21.65
CDY45656 Canola extracellular, golgi, plasma membrane 47.88 18.99
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 50.19 18.13
CDY46687 Canola extracellular, plasma membrane, vacuole 50.19 18.13
CDX92806 Canola extracellular, plasma membrane, vacuole 49.03 17.74
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 50.58 17.31
CDX86766 Canola plasma membrane 42.08 17.22
KRH46282 Soybean extracellular, plasma membrane 49.81 16.95
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 49.42 16.91
CDX89312 Canola extracellular, plasma membrane, vacuole 49.42 16.91
CDY13237 Canola extracellular, plasma membrane, vacuole 49.42 16.86
KRH14296 Soybean endoplasmic reticulum 49.03 16.84
CDX94294 Canola extracellular, plasma membrane, vacuole 49.03 16.78
KRH73850 Soybean endoplasmic reticulum 48.65 16.73
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 47.88 16.69
KRG98622 Soybean extracellular, golgi, plasma membrane 48.26 16.69
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 2.32 16.67
Bra035244.1-P Field mustard plasma membrane 48.65 16.62
CDY29432 Canola cytosol, peroxisome 38.22 16.61
KRH46281 Soybean extracellular, golgi, plasma membrane 48.65 16.56
CDY61647 Canola extracellular, plasma membrane 48.26 16.56
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 47.88 16.36
AT4G26690.1 Thale cress extracellular, vacuole 47.88 16.34
CDY17323 Canola plasma membrane 48.26 16.28
CDY12605 Canola extracellular, vacuole 44.79 16.2
Bra034037.1-P Field mustard extracellular, vacuole 44.79 16.2
GSMUA_Achr8P25690_001 Banana plasma membrane 47.49 16.18
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 46.33 15.98
AT1G66970.2 Thale cress plasma membrane 48.26 15.92
AT5G55480.1 Thale cress plasma membrane 45.17 15.27
KRH46279 Soybean extracellular 42.86 15.27
CDY58867 Canola plasma membrane 42.47 15.24
KRG98625 Soybean extracellular 41.7 14.96
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 44.79 14.76
Bra028979.1-P Field mustard plasma membrane 42.86 14.49
HORVU2Hr1G081920.3 Barley plasma membrane 41.31 14.38
CDY36746 Canola plasma membrane 42.47 14.36
EES10974 Sorghum golgi 40.93 14.15
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 40.54 14.11
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 40.54 14.11
AT3G20520.1 Thale cress plasma membrane 39.38 13.99
EES05342 Sorghum plasma membrane 40.54 13.94
TraesCS2D01G332500.1 Wheat golgi 39.77 13.84
Zm00001d050917_P002 Maize plasma membrane 39.77 13.68
TraesCS7A01G243900.3 Wheat golgi 40.54 13.65
TraesCS6A01G200600.1 Wheat golgi 39.38 13.64
CDY19634 Canola plasma membrane 38.22 13.64
Zm00001d017036_P002 Maize plasma membrane 40.15 13.47
CDY11996 Canola plasma membrane 40.15 13.45
TraesCS7B01G147500.1 Wheat unclear 39.77 13.34
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 39.0 13.2
TraesCS6D01G189300.1 Wheat unclear 37.84 13.12
TraesCS6B01G226700.2 Wheat golgi 37.45 12.99
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 40.15 12.84
KXG36695 Sorghum plasma membrane 37.07 12.39
Zm00001d022153_P006 Maize extracellular, mitochondrion 36.29 12.1
Bra035774.1-P Field mustard plasma membrane 37.84 12.0
Bra001790.1-P Field mustard plasma membrane 38.61 11.96
Zm00001d052875_P001 Maize mitochondrion 35.52 11.86
Zm00001d031412_P001 Maize extracellular 33.98 11.81
CDY36036 Canola plasma membrane 37.84 11.54
PGSC0003DMT400008461 Potato cytosol 33.59 11.31
OQU80956 Sorghum cytosol 38.61 11.3
PGSC0003DMT400008464 Potato cytosol 31.66 11.11
PGSC0003DMT400010411 Potato extracellular, golgi 16.6 11.0
GSMUA_Achr3P03920_001 Banana cytosol 32.05 10.51
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 38.22 10.27
AT1G66980.2 Thale cress plasma membrane 44.79 10.11
CDY14478 Canola plasma membrane 45.56 8.98
Bra035208.1-P Field mustard extracellular, golgi, plastid 8.88 8.42
CDY60415 Canola plasma membrane 37.84 8.26
GSMUA_AchrUn_... Banana extracellular 2.7 4.27
CDY60410 Canola extracellular 0.77 1.47
Bra034040.1-P Field mustard extracellular 0.77 1.47
CDY72472 Canola mitochondrion 1.54 1.06
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 1.16 0.6
KRH46280 Soybean cytosol 0.39 0.38
CDX86765 Canola extracellular, mitochondrion, vacuole 0.0 0.0
Zm00001d025670_P001 Maize mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400033459EnsemblPlantsGene:PGSC0003DMG400012853Gene3D:3.20.20.190GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946
InterPro:IPR030395InterPro:PLC-like_Pdiesterase_TIM-brlPANTHER:PTHR43620PANTHER:PTHR43620:SF1PFAM:PF03009PFscan:PS51704
PGSC:PGSC0003DMG400012853SUPFAM:SSF51695UniParc:UPI000295C965UniProt:M1AZ71MapMan:35.1:
Description
Glycerophosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400012853]
Coordinates
chr12:+:9605391..9607025
Molecular Weight (calculated)
28542.1 Da
IEP (calculated)
5.092
GRAVY (calculated)
0.027
Length
259 amino acids
Sequence
(BLAST)
001: MISINNAAYL ANQGLGVIAV VVEALRNTGY NNQTAKKVMI QSKDSSVLKE FEKSRYELVY MIDDNIRDIE SSTISEIKSF ASSVILTKNS VFRSEDDFLV
101: GKTDVVQKLH SSNLSVYVQR FNNEFVSQAW DFFPDSSVEI NNYIVVAGID GVITDFPRTA ATYRRNRCLG YKHRPLYFSP VETGGFLQFM ARQLLPPAET
201: PNPILSKSDV VEPPLPPVAK ITPAGNESTT DASPIGQSSV VAGILTCCLT ILLADLVIF
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.